Protein–RNA interactions for Protein: P47061

VPS53, Vacuolar protein sorting-associated protein 53, yeastyeast

Predictions only

Length 822 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS53P47061 SAM50YNL026W 1455 nt9.79□□□□□ -0.84
VPS53P47061 TMA23YMR269W 636 nt9.78□□□□□ -0.84
VPS53P47061 OSH7YHR001W 1314 nt9.78□□□□□ -0.84
VPS53P47061 YCR025CYCR025C 411 nt9.76□□□□□ -0.85
VPS53P47061 YOR325WYOR325W 474 nt9.76□□□□□ -0.85
VPS53P47061 ILV3YJR016C 1758 nt9.75□□□□□ -0.85
VPS53P47061 HEM13YDR044W 987 nt9.74□□□□□ -0.85
VPS53P47061 SPP2YOR148C 558 nt9.74□□□□□ -0.85
VPS53P47061 YER152W-AYER152W-A 567 nt9.73□□□□□ -0.85
VPS53P47061 IPL1YPL209C 1104 nt9.73□□□□□ -0.85
VPS53P47061 CWC15YDR163W 528 nt9.72□□□□□ -0.85
VPS53P47061 IMO32YGR031W 1029 nt9.72□□□□□ -0.85
VPS53P47061 SPS100YHR139C 981 nt9.72□□□□□ -0.85
VPS53P47061 KRE1YNL322C 942 nt9.72□□□□□ -0.85
VPS53P47061 SOL2YCR073W-A 948 nt9.71□□□□□ -0.86
VPS53P47061 DDI1YER143W 1287 nt9.71□□□□□ -0.86
VPS53P47061 tA(AGC)DtA(AGC)D 73 nt9.7□□□□□ -0.86
VPS53P47061 tA(AGC)FtA(AGC)F 73 nt9.7□□□□□ -0.86
VPS53P47061 tA(AGC)GtA(AGC)G 73 nt9.7□□□□□ -0.86
VPS53P47061 tA(AGC)HtA(AGC)H 73 nt9.7□□□□□ -0.86
VPS53P47061 tA(AGC)JtA(AGC)J 73 nt9.7□□□□□ -0.86
VPS53P47061 tA(AGC)K1tA(AGC)K1 73 nt9.7□□□□□ -0.86
VPS53P47061 tA(AGC)K2tA(AGC)K2 73 nt9.7□□□□□ -0.86
VPS53P47061 tA(AGC)LtA(AGC)L 73 nt9.7□□□□□ -0.86
VPS53P47061 tA(AGC)M1tA(AGC)M1 73 nt9.7□□□□□ -0.86
VPS53P47061 tA(AGC)M2tA(AGC)M2 73 nt9.7□□□□□ -0.86
VPS53P47061 tA(AGC)PtA(AGC)P 73 nt9.7□□□□□ -0.86
VPS53P47061 LSM5YER146W 282 nt9.69□□□□□ -0.86
VPS53P47061 UGP1YKL035W 1500 nt9.69□□□□□ -0.86
VPS53P47061 ACH1YBL015W 1581 nt9.69□□□□□ -0.86
VPS53P47061 YIL100C-AYIL100C-A 339 nt9.68□□□□□ -0.86
VPS53P47061 COQ8YGL119W 1506 nt9.67□□□□□ -0.86
VPS53P47061 HIS2YFR025C 1008 nt9.67□□□□□ -0.86
VPS53P47061 TAT2YOL020W 1779 nt9.65□□□□□ -0.86
VPS53P47061 BUD20YLR074C 501 nt9.64□□□□□ -0.87
VPS53P47061 RRT8YOL048C 1029 nt9.64□□□□□ -0.87
VPS53P47061 VPS62YGR141W 1404 nt9.64□□□□□ -0.87
VPS53P47061 YDR455CYDR455C 309 nt9.63□□□□□ -0.87
VPS53P47061 TPO4YOR273C 1980 nt9.63□□□□□ -0.87
VPS53P47061 SWM1YDR260C 513 nt9.62□□□□□ -0.87
VPS53P47061 FLX1YIL134W 936 nt9.62□□□□□ -0.87
VPS53P47061 YMR007WYMR007W 381 nt9.62□□□□□ -0.87
VPS53P47061 RCR1YBR005W 642 nt9.62□□□□□ -0.87
VPS53P47061 HMG2YLR450W 3138 nt9.62□□□□□ -0.87
VPS53P47061 ABZ2YMR289W 1125 nt9.61□□□□□ -0.87
VPS53P47061 BSP1YPR171W 1731 nt9.6□□□□□ -0.87
VPS53P47061 THP3YPR045C 1413 nt9.6□□□□□ -0.87
VPS53P47061 ADE8YDR408C 645 nt9.6□□□□□ -0.87
VPS53P47061 YFR036W-AYFR036W-A 651 nt9.6□□□□□ -0.87
VPS53P47061 NAS2YIL007C 663 nt9.6□□□□□ -0.87
VPS53P47061 ASP3-1YLR155C 1089 nt9.6□□□□□ -0.87
VPS53P47061 ASP3-2YLR157C 1089 nt9.6□□□□□ -0.87
VPS53P47061 ASP3-3YLR158C 1089 nt9.6□□□□□ -0.87
VPS53P47061 ASP3-4YLR160C 1089 nt9.6□□□□□ -0.87
VPS53P47061 CDD1YLR245C 429 nt9.6□□□□□ -0.87
VPS53P47061 ARO8YGL202W 1503 nt9.6□□□□□ -0.87
VPS53P47061 YDL086WYDL086W 822 nt9.58□□□□□ -0.88
VPS53P47061 LYS20YDL182W 1287 nt9.58□□□□□ -0.88
VPS53P47061 TVP23YDR084C 600 nt9.58□□□□□ -0.88
VPS53P47061 YEL009C-AYEL009C-A 408 nt9.58□□□□□ -0.88
VPS53P47061 FSH2YMR222C 672 nt9.58□□□□□ -0.88
VPS53P47061 PSD1YNL169C 1503 nt9.57□□□□□ -0.88
VPS53P47061 OPI10YOL032W 741 nt9.57□□□□□ -0.88
VPS53P47061 NPP1YCR026C 2229 nt9.56□□□□□ -0.88
VPS53P47061 YHL008CYHL008C 1884 nt9.56□□□□□ -0.88
VPS53P47061 ERG13YML126C 1476 nt9.56□□□□□ -0.88
VPS53P47061 YJR154WYJR154W 1041 nt9.56□□□□□ -0.88
VPS53P47061 REG2YBR050C 1017 nt9.56□□□□□ -0.88
VPS53P47061 SPE2YOL052C 1191 nt9.55□□□□□ -0.88
VPS53P47061 KES1YPL145C 1305 nt9.55□□□□□ -0.88
VPS53P47061 SGA1YIL099W 1650 nt9.55□□□□□ -0.88
VPS53P47061 CCT2YIL142W 1584 nt9.54□□□□□ -0.88
VPS53P47061 BET2YPR176C 978 nt9.54□□□□□ -0.88
VPS53P47061 CYC3YAL039C 810 nt9.53□□□□□ -0.88
VPS53P47061 SER2YGR208W 930 nt9.52□□□□□ -0.89
VPS53P47061 GID7YCL039W 2238 nt9.5□□□□□ -0.89
VPS53P47061 HTS1YPR033C 1641 nt9.49□□□□□ -0.89
VPS53P47061 MOB1YIL106W 945 nt9.49□□□□□ -0.89
VPS53P47061 ADH3YMR083W 1128 nt9.49□□□□□ -0.89
VPS53P47061 RPL12BYDR418W 498 nt9.48□□□□□ -0.89
VPS53P47061 PHB2YGR231C 933 nt9.48□□□□□ -0.89
VPS53P47061 YOR343CYOR343C 327 nt9.48□□□□□ -0.89
VPS53P47061 ENO2YHR174W 1314 nt9.48□□□□□ -0.89
VPS53P47061 LSB6YJL100W 1824 nt9.47□□□□□ -0.89
VPS53P47061 OPI3YJR073C 621 nt9.47□□□□□ -0.89
VPS53P47061 AIM1YAL046C 357 nt9.47□□□□□ -0.89
VPS53P47061 ZAP1YJL056C 2643 nt9.46□□□□□ -0.89
VPS53P47061 ENT4YLL038C 744 nt9.45□□□□□ -0.9
VPS53P47061 CYT1YOR065W 930 nt9.45□□□□□ -0.9
VPS53P47061 DMA2YNL116W 1569 nt9.45□□□□□ -0.9
VPS53P47061 SAC7YDR389W 1965 nt9.44□□□□□ -0.9
VPS53P47061 AMF1YOR378W 1548 nt9.43□□□□□ -0.9
VPS53P47061 PAM17YKR065C 594 nt9.43□□□□□ -0.9
VPS53P47061 DIG1YPL049C 1359 nt9.42□□□□□ -0.9
VPS53P47061 YAL016C-AYAL016C-A 315 nt9.42□□□□□ -0.9
VPS53P47061 TPC1YGR096W 945 nt9.41□□□□□ -0.9
VPS53P47061 HRA1HRA1 564 nt9.41□□□□□ -0.9
VPS53P47061 Q0010Q0010 387 nt9.41□□□□□ -0.9
VPS53P47061 SRP102YKL154W 735 nt9.4□□□□□ -0.9
VPS53P47061 LEU2YCL018W 1095 nt9.4□□□□□ -0.9
Retrieved 100 of 7,029 protein–RNA pairs in 12.3 ms