Protein–RNA interactions for Protein: P11978

SIR4, Regulatory protein SIR4, yeastyeast

Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SIR4P11978 tA(AGC)K2tA(AGC)K2 73 nt11.24□□□□□ -0.61
SIR4P11978 tA(AGC)LtA(AGC)L 73 nt11.24□□□□□ -0.61
SIR4P11978 tA(AGC)M1tA(AGC)M1 73 nt11.24□□□□□ -0.61
SIR4P11978 tA(AGC)M2tA(AGC)M2 73 nt11.24□□□□□ -0.61
SIR4P11978 tA(AGC)PtA(AGC)P 73 nt11.24□□□□□ -0.61
SIR4P11978 YER152W-AYER152W-A 567 nt11.24□□□□□ -0.61
SIR4P11978 CCT2YIL142W 1584 nt11.23□□□□□ -0.61
SIR4P11978 IMO32YGR031W 1029 nt11.23□□□□□ -0.61
SIR4P11978 ADE8YDR408C 645 nt11.22□□□□□ -0.61
SIR4P11978 CDD1YLR245C 429 nt11.22□□□□□ -0.61
SIR4P11978 IPL1YPL209C 1104 nt11.22□□□□□ -0.61
SIR4P11978 SPE2YOL052C 1191 nt11.21□□□□□ -0.61
SIR4P11978 TAT2YOL020W 1779 nt11.2□□□□□ -0.62
SIR4P11978 YFR036W-AYFR036W-A 651 nt11.2□□□□□ -0.62
SIR4P11978 BET2YPR176C 978 nt11.19□□□□□ -0.62
SIR4P11978 LYS20YDL182W 1287 nt11.18□□□□□ -0.62
SIR4P11978 RDN25-1RDN25-1 3396 nt11.18□□□□□ -0.62
SIR4P11978 RDN25-2RDN25-2 3396 nt11.18□□□□□ -0.62
SIR4P11978 ILV3YJR016C 1758 nt11.18□□□□□ -0.62
SIR4P11978 ABZ2YMR289W 1125 nt11.17□□□□□ -0.62
SIR4P11978 YDL086WYDL086W 822 nt11.16□□□□□ -0.62
SIR4P11978 FLX1YIL134W 936 nt11.16□□□□□ -0.62
SIR4P11978 OPI10YOL032W 741 nt11.16□□□□□ -0.62
SIR4P11978 YDR455CYDR455C 309 nt11.16□□□□□ -0.62
SIR4P11978 MUP1YGR055W 1725 nt11.15□□□□□ -0.62
SIR4P11978 AIM1YAL046C 357 nt11.15□□□□□ -0.63
SIR4P11978 ASP3-1YLR155C 1089 nt11.13□□□□□ -0.63
SIR4P11978 ASP3-2YLR157C 1089 nt11.13□□□□□ -0.63
SIR4P11978 ASP3-3YLR158C 1089 nt11.13□□□□□ -0.63
SIR4P11978 ASP3-4YLR160C 1089 nt11.13□□□□□ -0.63
SIR4P11978 BUD20YLR074C 501 nt11.12□□□□□ -0.63
SIR4P11978 SWM1YDR260C 513 nt11.1□□□□□ -0.63
SIR4P11978 ADH3YMR083W 1128 nt11.1□□□□□ -0.63
SIR4P11978 ERG13YML126C 1476 nt11.08□□□□□ -0.64
SIR4P11978 THP3YPR045C 1413 nt11.08□□□□□ -0.64
SIR4P11978 ENO2YHR174W 1314 nt11.06□□□□□ -0.64
SIR4P11978 LSB6YJL100W 1824 nt11.05□□□□□ -0.64
SIR4P11978 PHB2YGR231C 933 nt11.04□□□□□ -0.64
SIR4P11978 MOB1YIL106W 945 nt11.04□□□□□ -0.64
SIR4P11978 RRT8YOL048C 1029 nt11.03□□□□□ -0.64
SIR4P11978 DIG1YPL049C 1359 nt11.03□□□□□ -0.64
SIR4P11978 TGA1tA(UGC)A 73 nt11.03□□□□□ -0.64
SIR4P11978 tA(UGC)EtA(UGC)E 73 nt11.03□□□□□ -0.64
SIR4P11978 tA(UGC)GtA(UGC)G 73 nt11.03□□□□□ -0.64
SIR4P11978 tA(UGC)LtA(UGC)L 73 nt11.03□□□□□ -0.64
SIR4P11978 tA(UGC)OtA(UGC)O 73 nt11.03□□□□□ -0.64
SIR4P11978 ARO8YGL202W 1503 nt11.02□□□□□ -0.64
SIR4P11978 YMR007WYMR007W 381 nt11.02□□□□□ -0.65
SIR4P11978 KES1YPL145C 1305 nt11.01□□□□□ -0.65
SIR4P11978 SER2YGR208W 930 nt11.01□□□□□ -0.65
SIR4P11978 HOL1YNR055C 1761 nt11□□□□□ -0.65
SIR4P11978 COQ8YGL119W 1506 nt11□□□□□ -0.65
SIR4P11978 TVP23YDR084C 600 nt11□□□□□ -0.65
SIR4P11978 YLR046CYLR046C 813 nt11□□□□□ -0.65
SIR4P11978 TPC1YGR096W 945 nt10.98□□□□□ -0.65
SIR4P11978 OPI3YJR073C 621 nt10.98□□□□□ -0.65
SIR4P11978 FCY1YPR062W 477 nt10.98□□□□□ -0.65
SIR4P11978 FSH2YMR222C 672 nt10.96□□□□□ -0.65
SIR4P11978 RCR1YBR005W 642 nt10.96□□□□□ -0.65
SIR4P11978 RDN37-1RDN37-1 5354 nt10.96□□□□□ -0.66
SIR4P11978 RDN37-2RDN37-2 5354 nt10.96□□□□□ -0.66
SIR4P11978 PCP1YGR101W 1041 nt10.95□□□□□ -0.66
SIR4P11978 GID8YMR135C 1368 nt10.95□□□□□ -0.66
SIR4P11978 HTS1YPR033C 1641 nt10.94□□□□□ -0.66
SIR4P11978 CYC3YAL039C 810 nt10.94□□□□□ -0.66
SIR4P11978 YKR012CYKR012C 378 nt10.93□□□□□ -0.66
SIR4P11978 AMF1YOR378W 1548 nt10.9□□□□□ -0.66
SIR4P11978 ELO1YJL196C 933 nt10.9□□□□□ -0.67
SIR4P11978 ENT4YLL038C 744 nt10.9□□□□□ -0.67
SIR4P11978 PAU21YOR394W 495 nt10.89□□□□□ -0.67
SIR4P11978 PAU22YPL282C 495 nt10.89□□□□□ -0.67
SIR4P11978 SAC7YDR389W 1965 nt10.88□□□□□ -0.67
SIR4P11978 SGA1YIL099W 1650 nt10.88□□□□□ -0.67
SIR4P11978 LSR1LSR1 1175 nt10.88□□□□□ -0.67
SIR4P11978 YNR064CYNR064C 873 nt10.88□□□□□ -0.67
SIR4P11978 MRS6YOR370C 1812 nt10.88□□□□□ -0.67
SIR4P11978 YKL133CYKL133C 1392 nt10.86□□□□□ -0.67
SIR4P11978 GRH1YDR517W 1119 nt10.86□□□□□ -0.67
SIR4P11978 YOR343CYOR343C 327 nt10.86□□□□□ -0.67
SIR4P11978 ITR2YOL103W 1830 nt10.86□□□□□ -0.67
SIR4P11978 DLD3YEL071W 1491 nt10.84□□□□□ -0.67
SIR4P11978 UGP1YKL035W 1500 nt10.84□□□□□ -0.67
SIR4P11978 NAM8YHR086W 1572 nt10.83□□□□□ -0.68
SIR4P11978 ERO1YML130C 1692 nt10.83□□□□□ -0.68
SIR4P11978 LEU2YCL018W 1095 nt10.82□□□□□ -0.68
SIR4P11978 RPL12BYDR418W 498 nt10.81□□□□□ -0.68
SIR4P11978 HIS2YFR025C 1008 nt10.81□□□□□ -0.68
SIR4P11978 SRP102YKL154W 735 nt10.81□□□□□ -0.68
SIR4P11978 YGR210CYGR210C 1236 nt10.8□□□□□ -0.68
SIR4P11978 SDS24YBR214W 1584 nt10.79□□□□□ -0.68
SIR4P11978 YAL016C-AYAL016C-A 315 nt10.79□□□□□ -0.68
SIR4P11978 YLR280CYLR280C 351 nt10.79□□□□□ -0.68
SIR4P11978 ENO1YGR254W 1314 nt10.79□□□□□ -0.68
SIR4P11978 YHR219WYHR219W 1875 nt10.78□□□□□ -0.68
SIR4P11978 HRA1HRA1 564 nt10.77□□□□□ -0.68
SIR4P11978 RIM8YGL045W 1629 nt10.75□□□□□ -0.69
SIR4P11978 VMA11YPL234C 495 nt10.75□□□□□ -0.69
SIR4P11978 EMC3YKL207W 762 nt10.74□□□□□ -0.69
SIR4P11978 REX2YLR059C 810 nt10.74□□□□□ -0.69
SIR4P11978 KAE1YKR038C 1161 nt10.71□□□□□ -0.69
Retrieved 100 of 7,029 protein–RNA pairs in 15.8 ms