Protein–RNA interactions for Protein: P10720

PF4V1, Platelet factor 4 variant, humanhuman

Predictions only

Length 104 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PF4V1P10720 DUX4L29-201ENST00000425409 679 ntBASIC20.75■□□□□ 0.91
PF4V1P10720 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC20.74■□□□□ 0.91
PF4V1P10720 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PF4V1P10720 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
PF4V1P10720 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC20.73■□□□□ 0.91
PF4V1P10720 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC20.73■□□□□ 0.91
PF4V1P10720 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
PF4V1P10720 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PF4V1P10720 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PF4V1P10720 CIB2-204ENST00000557846 934 ntTSL 3 BASIC20.72■□□□□ 0.91
PF4V1P10720 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
PF4V1P10720 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
PF4V1P10720 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC20.71■□□□□ 0.91
PF4V1P10720 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
PF4V1P10720 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PF4V1P10720 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PF4V1P10720 MBP-237ENST00000579129 1052 ntTSL 5 BASIC20.71■□□□□ 0.91
PF4V1P10720 HGH1-207ENST00000628266 258 ntTSL 5 BASIC20.71■□□□□ 0.91
PF4V1P10720 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC20.71■□□□□ 0.91
PF4V1P10720 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
PF4V1P10720 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
PF4V1P10720 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC20.7■□□□□ 0.91
PF4V1P10720 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PF4V1P10720 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC20.7■□□□□ 0.9
PF4V1P10720 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
PF4V1P10720 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
PF4V1P10720 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
PF4V1P10720 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC20.69■□□□□ 0.9
PF4V1P10720 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PF4V1P10720 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PF4V1P10720 ST7-205ENST00000393446 2114 ntTSL 5 BASIC20.68■□□□□ 0.9
PF4V1P10720 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
PF4V1P10720 AC108673.1-201ENST00000510422 1159 ntBASIC20.67■□□□□ 0.9
PF4V1P10720 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC20.67■□□□□ 0.9
PF4V1P10720 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PF4V1P10720 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PF4V1P10720 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
PF4V1P10720 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PF4V1P10720 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PF4V1P10720 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PF4V1P10720 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC20.65■□□□□ 0.9
PF4V1P10720 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
PF4V1P10720 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
PF4V1P10720 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
PF4V1P10720 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PF4V1P10720 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC20.63■□□□□ 0.89
PF4V1P10720 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PF4V1P10720 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PF4V1P10720 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PF4V1P10720 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC20.63■□□□□ 0.89
PF4V1P10720 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC20.63■□□□□ 0.89
PF4V1P10720 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
PF4V1P10720 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
PF4V1P10720 ST7-202ENST00000323984 2142 ntTSL 5 BASIC20.61■□□□□ 0.89
PF4V1P10720 ST7-207ENST00000393449 2127 ntTSL 5 BASIC20.61■□□□□ 0.89
PF4V1P10720 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
PF4V1P10720 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PF4V1P10720 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PF4V1P10720 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC20.6■□□□□ 0.89
PF4V1P10720 AC021231.2-201ENST00000594613 730 ntBASIC20.6■□□□□ 0.89
PF4V1P10720 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PF4V1P10720 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
PF4V1P10720 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PF4V1P10720 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
PF4V1P10720 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC20.58■□□□□ 0.88
PF4V1P10720 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
PF4V1P10720 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
PF4V1P10720 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
PF4V1P10720 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
PF4V1P10720 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PF4V1P10720 AC010864.1-201ENST00000609407 1511 ntBASIC20.56■□□□□ 0.88
PF4V1P10720 AL135925.1-201ENST00000605920 1701 ntBASIC20.56■□□□□ 0.88
PF4V1P10720 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC20.55■□□□□ 0.88
PF4V1P10720 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
PF4V1P10720 MIR6090-201ENST00000622481 60 ntBASIC20.55■□□□□ 0.88
PF4V1P10720 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
PF4V1P10720 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
PF4V1P10720 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
PF4V1P10720 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PF4V1P10720 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
PF4V1P10720 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC20.54■□□□□ 0.88
PF4V1P10720 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC20.54■□□□□ 0.88
PF4V1P10720 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PF4V1P10720 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
PF4V1P10720 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PF4V1P10720 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC20.53■□□□□ 0.88
PF4V1P10720 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC20.53■□□□□ 0.88
PF4V1P10720 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
PF4V1P10720 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC20.52■□□□□ 0.88
PF4V1P10720 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
PF4V1P10720 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
PF4V1P10720 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PF4V1P10720 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
PF4V1P10720 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC20.51■□□□□ 0.87
PF4V1P10720 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PF4V1P10720 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC20.5■□□□□ 0.87
PF4V1P10720 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
PF4V1P10720 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
PF4V1P10720 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
PF4V1P10720 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC20.49■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms