Protein–RNA interactions for Protein: P0CG21

NHLRC4, NHL-repeat-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC4P0CG21 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NHLRC4P0CG21 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC19.44■□□□□ 0.7
NHLRC4P0CG21 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
NHLRC4P0CG21 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
NHLRC4P0CG21 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC19.43■□□□□ 0.7
NHLRC4P0CG21 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
NHLRC4P0CG21 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NHLRC4P0CG21 HES6-205ENST00000409356 528 ntTSL 2 BASIC19.42■□□□□ 0.7
NHLRC4P0CG21 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NHLRC4P0CG21 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NHLRC4P0CG21 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
NHLRC4P0CG21 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NHLRC4P0CG21 ABHD17AP5-201ENST00000580133 923 ntBASIC19.4■□□□□ 0.7
NHLRC4P0CG21 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
NHLRC4P0CG21 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
NHLRC4P0CG21 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
NHLRC4P0CG21 RARRES2P2-201ENST00000394842 485 ntBASIC19.39■□□□□ 0.69
NHLRC4P0CG21 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
NHLRC4P0CG21 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC19.39■□□□□ 0.69
NHLRC4P0CG21 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
NHLRC4P0CG21 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
NHLRC4P0CG21 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
NHLRC4P0CG21 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
NHLRC4P0CG21 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
NHLRC4P0CG21 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
NHLRC4P0CG21 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
NHLRC4P0CG21 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
NHLRC4P0CG21 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
NHLRC4P0CG21 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC19.37■□□□□ 0.69
NHLRC4P0CG21 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC19.36■□□□□ 0.69
NHLRC4P0CG21 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC19.36■□□□□ 0.69
NHLRC4P0CG21 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
NHLRC4P0CG21 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC19.35■□□□□ 0.69
NHLRC4P0CG21 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
NHLRC4P0CG21 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC19.35■□□□□ 0.69
NHLRC4P0CG21 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
NHLRC4P0CG21 EI24-212ENST00000615917 1407 ntTSL 2 BASIC19.34■□□□□ 0.69
NHLRC4P0CG21 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
NHLRC4P0CG21 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
NHLRC4P0CG21 SRP68-213ENST00000629930 165 ntTSL 5 BASIC19.34■□□□□ 0.69
NHLRC4P0CG21 CHML-204ENST00000638121 920 ntTSL 2 BASIC19.34■□□□□ 0.69
NHLRC4P0CG21 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
NHLRC4P0CG21 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
NHLRC4P0CG21 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC19.33■□□□□ 0.68
NHLRC4P0CG21 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
NHLRC4P0CG21 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC19.32■□□□□ 0.68
NHLRC4P0CG21 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NHLRC4P0CG21 RNF126P1-201ENST00000567452 1320 ntBASIC19.3■□□□□ 0.68
NHLRC4P0CG21 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NHLRC4P0CG21 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC19.29■□□□□ 0.68
NHLRC4P0CG21 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NHLRC4P0CG21 GPX1-201ENST00000419349 1106 ntBASIC19.29■□□□□ 0.68
NHLRC4P0CG21 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC19.29■□□□□ 0.68
NHLRC4P0CG21 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC19.29■□□□□ 0.68
NHLRC4P0CG21 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
NHLRC4P0CG21 TPT1-202ENST00000379055 948 ntTSL 2 BASIC19.28■□□□□ 0.68
NHLRC4P0CG21 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC19.28■□□□□ 0.68
NHLRC4P0CG21 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
NHLRC4P0CG21 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NHLRC4P0CG21 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
NHLRC4P0CG21 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NHLRC4P0CG21 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
NHLRC4P0CG21 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC19.24■□□□□ 0.67
NHLRC4P0CG21 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
NHLRC4P0CG21 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
NHLRC4P0CG21 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NHLRC4P0CG21 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NHLRC4P0CG21 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NHLRC4P0CG21 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC19.22■□□□□ 0.67
NHLRC4P0CG21 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
NHLRC4P0CG21 HES4-202ENST00000428771 1040 ntTSL 2 BASIC19.21■□□□□ 0.67
NHLRC4P0CG21 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
NHLRC4P0CG21 CHST11-202ENST00000546689 756 ntTSL 2 BASIC19.21■□□□□ 0.67
NHLRC4P0CG21 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
NHLRC4P0CG21 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NHLRC4P0CG21 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
NHLRC4P0CG21 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
NHLRC4P0CG21 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
NHLRC4P0CG21 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
NHLRC4P0CG21 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC19.2■□□□□ 0.66
NHLRC4P0CG21 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
NHLRC4P0CG21 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
NHLRC4P0CG21 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
NHLRC4P0CG21 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
NHLRC4P0CG21 CEP120-209ENST00000515110 606 ntTSL 3 BASIC19.19■□□□□ 0.66
NHLRC4P0CG21 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
NHLRC4P0CG21 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
NHLRC4P0CG21 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC19.19■□□□□ 0.66
NHLRC4P0CG21 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC19.19■□□□□ 0.66
NHLRC4P0CG21 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
NHLRC4P0CG21 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
NHLRC4P0CG21 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
NHLRC4P0CG21 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
NHLRC4P0CG21 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
NHLRC4P0CG21 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC19.17■□□□□ 0.66
NHLRC4P0CG21 AC012354.3-201ENST00000623734 483 ntBASIC19.17■□□□□ 0.66
NHLRC4P0CG21 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
NHLRC4P0CG21 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC19.16■□□□□ 0.66
NHLRC4P0CG21 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC19.16■□□□□ 0.66
NHLRC4P0CG21 NTF6A-201ENST00000591175 560 ntBASIC19.16■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms