Protein–RNA interactions for Protein: O75346

ZNF253, Zinc finger protein 253, humanhuman

Predictions only

Length 499 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF253O75346 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ZNF253O75346 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ZNF253O75346 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
ZNF253O75346 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
ZNF253O75346 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
ZNF253O75346 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
ZNF253O75346 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ZNF253O75346 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ZNF253O75346 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ZNF253O75346 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC20.17■□□□□ 0.82
ZNF253O75346 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
ZNF253O75346 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ZNF253O75346 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ZNF253O75346 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
ZNF253O75346 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC20.16■□□□□ 0.82
ZNF253O75346 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
ZNF253O75346 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC20.15■□□□□ 0.82
ZNF253O75346 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC20.14■□□□□ 0.81
ZNF253O75346 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
ZNF253O75346 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC20.14■□□□□ 0.81
ZNF253O75346 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC20.14■□□□□ 0.81
ZNF253O75346 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
ZNF253O75346 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
ZNF253O75346 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
ZNF253O75346 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
ZNF253O75346 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
ZNF253O75346 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
ZNF253O75346 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
ZNF253O75346 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC20.12■□□□□ 0.81
ZNF253O75346 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
ZNF253O75346 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
ZNF253O75346 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
ZNF253O75346 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
ZNF253O75346 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
ZNF253O75346 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC20.11■□□□□ 0.81
ZNF253O75346 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
ZNF253O75346 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC20.1■□□□□ 0.81
ZNF253O75346 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC20.1■□□□□ 0.81
ZNF253O75346 WASH5P-204ENST00000632292 975 ntBASIC20.1■□□□□ 0.81
ZNF253O75346 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC20.1■□□□□ 0.81
ZNF253O75346 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
ZNF253O75346 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
ZNF253O75346 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC20.09■□□□□ 0.81
ZNF253O75346 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC20.09■□□□□ 0.81
ZNF253O75346 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
ZNF253O75346 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
ZNF253O75346 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
ZNF253O75346 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC20.08■□□□□ 0.81
ZNF253O75346 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
ZNF253O75346 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
ZNF253O75346 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
ZNF253O75346 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC20.06■□□□□ 0.8
ZNF253O75346 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
ZNF253O75346 AC142086.6-201ENST00000621154 1765 ntBASIC20.05■□□□□ 0.8
ZNF253O75346 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC20.05■□□□□ 0.8
ZNF253O75346 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
ZNF253O75346 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
ZNF253O75346 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC20.04■□□□□ 0.8
ZNF253O75346 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
ZNF253O75346 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ZNF253O75346 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ZNF253O75346 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ZNF253O75346 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ZNF253O75346 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC20.02■□□□□ 0.8
ZNF253O75346 KLF16-203ENST00000592313 508 ntTSL 3 BASIC20.02■□□□□ 0.8
ZNF253O75346 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
ZNF253O75346 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC20.01■□□□□ 0.79
ZNF253O75346 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
ZNF253O75346 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
ZNF253O75346 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC20.01■□□□□ 0.79
ZNF253O75346 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
ZNF253O75346 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
ZNF253O75346 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC20■□□□□ 0.79
ZNF253O75346 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
ZNF253O75346 CREM-210ENST00000374721 2020 ntTSL 5 BASIC20■□□□□ 0.79
ZNF253O75346 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
ZNF253O75346 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
ZNF253O75346 AL133380.1-201ENST00000506013 324 ntBASIC19.99■□□□□ 0.79
ZNF253O75346 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
ZNF253O75346 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
ZNF253O75346 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
ZNF253O75346 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
ZNF253O75346 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC19.98■□□□□ 0.79
ZNF253O75346 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
ZNF253O75346 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC19.98■□□□□ 0.79
ZNF253O75346 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
ZNF253O75346 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
ZNF253O75346 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
ZNF253O75346 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
ZNF253O75346 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
ZNF253O75346 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
ZNF253O75346 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC19.96■□□□□ 0.79
ZNF253O75346 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
ZNF253O75346 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
ZNF253O75346 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
ZNF253O75346 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
ZNF253O75346 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC19.95■□□□□ 0.78
ZNF253O75346 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
ZNF253O75346 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC19.95■□□□□ 0.78
ZNF253O75346 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC19.95■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms