Protein–RNA interactions for Protein: O60925

PFDN1, Prefoldin subunit 1, humanhuman

Predictions only

Length 122 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1O60925 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC23.8■■□□□ 1.4
PFDN1O60925 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC23.8■■□□□ 1.4
PFDN1O60925 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC23.8■■□□□ 1.4
PFDN1O60925 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
PFDN1O60925 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC23.79■■□□□ 1.4
PFDN1O60925 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC23.79■■□□□ 1.4
PFDN1O60925 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
PFDN1O60925 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC23.78■■□□□ 1.4
PFDN1O60925 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC23.78■■□□□ 1.4
PFDN1O60925 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
PFDN1O60925 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
PFDN1O60925 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
PFDN1O60925 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
PFDN1O60925 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
PFDN1O60925 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC23.77■■□□□ 1.4
PFDN1O60925 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC23.75■■□□□ 1.39
PFDN1O60925 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC23.75■■□□□ 1.39
PFDN1O60925 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
PFDN1O60925 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC23.75■■□□□ 1.39
PFDN1O60925 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
PFDN1O60925 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC23.74■■□□□ 1.39
PFDN1O60925 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC23.74■■□□□ 1.39
PFDN1O60925 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC23.73■■□□□ 1.39
PFDN1O60925 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC23.73■■□□□ 1.39
PFDN1O60925 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC23.73■■□□□ 1.39
PFDN1O60925 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC23.73■■□□□ 1.39
PFDN1O60925 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC23.72■■□□□ 1.39
PFDN1O60925 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC23.72■■□□□ 1.39
PFDN1O60925 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
PFDN1O60925 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
PFDN1O60925 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
PFDN1O60925 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
PFDN1O60925 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC23.7■■□□□ 1.38
PFDN1O60925 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC23.7■■□□□ 1.38
PFDN1O60925 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
PFDN1O60925 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
PFDN1O60925 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC23.68■■□□□ 1.38
PFDN1O60925 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
PFDN1O60925 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
PFDN1O60925 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC23.67■■□□□ 1.38
PFDN1O60925 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
PFDN1O60925 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC23.66■■□□□ 1.38
PFDN1O60925 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
PFDN1O60925 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
PFDN1O60925 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC23.66■■□□□ 1.38
PFDN1O60925 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
PFDN1O60925 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC23.66■■□□□ 1.38
PFDN1O60925 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
PFDN1O60925 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
PFDN1O60925 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC23.66■■□□□ 1.38
PFDN1O60925 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC23.65■■□□□ 1.38
PFDN1O60925 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
PFDN1O60925 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC23.64■■□□□ 1.38
PFDN1O60925 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
PFDN1O60925 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC23.63■■□□□ 1.37
PFDN1O60925 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC23.63■■□□□ 1.37
PFDN1O60925 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
PFDN1O60925 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC23.62■■□□□ 1.37
PFDN1O60925 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
PFDN1O60925 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC23.62■■□□□ 1.37
PFDN1O60925 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC23.62■■□□□ 1.37
PFDN1O60925 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
PFDN1O60925 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
PFDN1O60925 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
PFDN1O60925 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
PFDN1O60925 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
PFDN1O60925 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC23.59■■□□□ 1.37
PFDN1O60925 AL449106.1-201ENST00000608517 1980 ntBASIC23.59■■□□□ 1.37
PFDN1O60925 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC23.59■■□□□ 1.37
PFDN1O60925 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
PFDN1O60925 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC23.59■■□□□ 1.37
PFDN1O60925 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC23.58■■□□□ 1.37
PFDN1O60925 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC23.57■■□□□ 1.36
PFDN1O60925 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
PFDN1O60925 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
PFDN1O60925 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
PFDN1O60925 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC23.54■■□□□ 1.36
PFDN1O60925 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
PFDN1O60925 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
PFDN1O60925 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
PFDN1O60925 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
PFDN1O60925 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
PFDN1O60925 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
PFDN1O60925 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC23.53■■□□□ 1.36
PFDN1O60925 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC23.53■■□□□ 1.36
PFDN1O60925 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC23.52■■□□□ 1.36
PFDN1O60925 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC23.52■■□□□ 1.36
PFDN1O60925 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC23.52■■□□□ 1.36
PFDN1O60925 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC23.52■■□□□ 1.36
PFDN1O60925 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC23.51■■□□□ 1.35
PFDN1O60925 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
PFDN1O60925 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC23.51■■□□□ 1.35
PFDN1O60925 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
PFDN1O60925 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
PFDN1O60925 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
PFDN1O60925 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC23.5■■□□□ 1.35
PFDN1O60925 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
PFDN1O60925 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
PFDN1O60925 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC23.49■■□□□ 1.35
PFDN1O60925 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC23.49■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms