Protein–RNA interactions for Protein: D6RBM5

USP17L23, Putative ubiquitin carboxyl-terminal hydrolase 17-like protein 23, humanhuman

Predictions only

Length 183 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP17L23D6RBM5 AC005559.1-201ENST00000589661 871 ntBASIC17.52■□□□□ 0.4
USP17L23D6RBM5 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
USP17L23D6RBM5 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
USP17L23D6RBM5 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
USP17L23D6RBM5 RPS2-209ENST00000529806 993 ntTSL 3 BASIC17.51■□□□□ 0.39
USP17L23D6RBM5 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC17.51■□□□□ 0.39
USP17L23D6RBM5 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
USP17L23D6RBM5 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
USP17L23D6RBM5 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
USP17L23D6RBM5 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
USP17L23D6RBM5 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
USP17L23D6RBM5 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
USP17L23D6RBM5 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
USP17L23D6RBM5 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC17.5■□□□□ 0.39
USP17L23D6RBM5 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC17.49■□□□□ 0.39
USP17L23D6RBM5 AP006261.1-201ENST00000584783 668 ntBASIC17.49■□□□□ 0.39
USP17L23D6RBM5 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
USP17L23D6RBM5 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
USP17L23D6RBM5 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
USP17L23D6RBM5 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
USP17L23D6RBM5 MIR3665-201ENST00000578708 105 ntBASIC17.47■□□□□ 0.39
USP17L23D6RBM5 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
USP17L23D6RBM5 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
USP17L23D6RBM5 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC17.46■□□□□ 0.39
USP17L23D6RBM5 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
USP17L23D6RBM5 AL135925.1-201ENST00000605920 1701 ntBASIC17.45■□□□□ 0.38
USP17L23D6RBM5 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC17.45■□□□□ 0.38
USP17L23D6RBM5 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
USP17L23D6RBM5 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
USP17L23D6RBM5 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
USP17L23D6RBM5 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC17.44■□□□□ 0.38
USP17L23D6RBM5 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
USP17L23D6RBM5 DUX4L28-201ENST00000623687 678 ntBASIC17.44■□□□□ 0.38
USP17L23D6RBM5 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
USP17L23D6RBM5 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC17.44■□□□□ 0.38
USP17L23D6RBM5 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
USP17L23D6RBM5 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
USP17L23D6RBM5 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC17.43■□□□□ 0.38
USP17L23D6RBM5 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
USP17L23D6RBM5 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
USP17L23D6RBM5 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
USP17L23D6RBM5 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
USP17L23D6RBM5 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
USP17L23D6RBM5 AL162393.1-201ENST00000437852 946 ntBASIC17.42■□□□□ 0.38
USP17L23D6RBM5 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
USP17L23D6RBM5 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC17.41■□□□□ 0.38
USP17L23D6RBM5 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
USP17L23D6RBM5 AC010864.1-201ENST00000609407 1511 ntBASIC17.41■□□□□ 0.38
USP17L23D6RBM5 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
USP17L23D6RBM5 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
USP17L23D6RBM5 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC17.4■□□□□ 0.38
USP17L23D6RBM5 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
USP17L23D6RBM5 AC135731.1-201ENST00000569415 2548 ntBASIC17.4■□□□□ 0.38
USP17L23D6RBM5 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
USP17L23D6RBM5 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
USP17L23D6RBM5 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC17.4■□□□□ 0.38
USP17L23D6RBM5 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
USP17L23D6RBM5 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
USP17L23D6RBM5 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
USP17L23D6RBM5 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
USP17L23D6RBM5 ST7-AS1-201ENST00000456775 1889 ntBASIC17.39■□□□□ 0.38
USP17L23D6RBM5 ABCB10P1-201ENST00000614297 2181 ntBASIC17.39■□□□□ 0.37
USP17L23D6RBM5 NRG1-221ENST00000614767 762 ntTSL 5 BASIC17.39■□□□□ 0.37
USP17L23D6RBM5 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
USP17L23D6RBM5 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
USP17L23D6RBM5 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
USP17L23D6RBM5 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
USP17L23D6RBM5 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
USP17L23D6RBM5 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
USP17L23D6RBM5 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC17.37■□□□□ 0.37
USP17L23D6RBM5 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
USP17L23D6RBM5 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
USP17L23D6RBM5 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
USP17L23D6RBM5 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC17.37■□□□□ 0.37
USP17L23D6RBM5 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
USP17L23D6RBM5 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
USP17L23D6RBM5 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
USP17L23D6RBM5 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC17.37■□□□□ 0.37
USP17L23D6RBM5 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
USP17L23D6RBM5 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
USP17L23D6RBM5 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
USP17L23D6RBM5 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
USP17L23D6RBM5 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
USP17L23D6RBM5 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC17.35■□□□□ 0.37
USP17L23D6RBM5 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC17.35■□□□□ 0.37
USP17L23D6RBM5 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
USP17L23D6RBM5 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
USP17L23D6RBM5 SHF-206ENST00000560471 2499 ntTSL 5 BASIC17.34■□□□□ 0.37
USP17L23D6RBM5 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
USP17L23D6RBM5 AC087741.3-201ENST00000624270 1347 ntBASIC17.34■□□□□ 0.37
USP17L23D6RBM5 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
USP17L23D6RBM5 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
USP17L23D6RBM5 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.37
USP17L23D6RBM5 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
USP17L23D6RBM5 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC17.33■□□□□ 0.36
USP17L23D6RBM5 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
USP17L23D6RBM5 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
USP17L23D6RBM5 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
USP17L23D6RBM5 RPS2P35-201ENST00000443417 897 ntBASIC17.32■□□□□ 0.36
USP17L23D6RBM5 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 14.9 ms