Protein–RNA interactions for Protein: A6NKU9

SPDYE3, Speedy protein E3, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPDYE3A6NKU9 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC30.11■■■□□ 2.41
SPDYE3A6NKU9 AC010864.1-201ENST00000609407 1511 ntBASIC30.1■■■□□ 2.41
SPDYE3A6NKU9 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC30.1■■■□□ 2.41
SPDYE3A6NKU9 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC30.09■■■□□ 2.41
SPDYE3A6NKU9 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC30.09■■■□□ 2.41
SPDYE3A6NKU9 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC30.08■■■□□ 2.41
SPDYE3A6NKU9 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC30.08■■■□□ 2.41
SPDYE3A6NKU9 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC30.08■■■□□ 2.41
SPDYE3A6NKU9 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC30.08■■■□□ 2.41
SPDYE3A6NKU9 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC30.08■■■□□ 2.41
SPDYE3A6NKU9 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC30.08■■■□□ 2.41
SPDYE3A6NKU9 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
SPDYE3A6NKU9 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC30.07■■■□□ 2.4
SPDYE3A6NKU9 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC30.07■■■□□ 2.4
SPDYE3A6NKU9 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
SPDYE3A6NKU9 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC30.07■■■□□ 2.4
SPDYE3A6NKU9 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC30.07■■■□□ 2.4
SPDYE3A6NKU9 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
SPDYE3A6NKU9 DUX4L29-201ENST00000425409 679 ntBASIC30.06■■■□□ 2.4
SPDYE3A6NKU9 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
SPDYE3A6NKU9 ABHD17AP4-201ENST00000411545 909 ntBASIC30.05■■■□□ 2.4
SPDYE3A6NKU9 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
SPDYE3A6NKU9 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
SPDYE3A6NKU9 AL135925.1-201ENST00000605920 1701 ntBASIC30.04■■■□□ 2.4
SPDYE3A6NKU9 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC30.04■■■□□ 2.4
SPDYE3A6NKU9 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
SPDYE3A6NKU9 HGH1-207ENST00000628266 258 ntTSL 5 BASIC30.01■■■□□ 2.39
SPDYE3A6NKU9 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC30.01■■■□□ 2.39
SPDYE3A6NKU9 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC30.01■■■□□ 2.39
SPDYE3A6NKU9 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC30■■■□□ 2.39
SPDYE3A6NKU9 AC021231.2-201ENST00000594613 730 ntBASIC30■■■□□ 2.39
SPDYE3A6NKU9 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
SPDYE3A6NKU9 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC29.99■■■□□ 2.39
SPDYE3A6NKU9 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC29.96■■■□□ 2.39
SPDYE3A6NKU9 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC29.96■■■□□ 2.39
SPDYE3A6NKU9 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
SPDYE3A6NKU9 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
SPDYE3A6NKU9 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC29.96■■■□□ 2.39
SPDYE3A6NKU9 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC29.96■■■□□ 2.39
SPDYE3A6NKU9 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC29.95■■■□□ 2.39
SPDYE3A6NKU9 ST7-205ENST00000393446 2114 ntTSL 5 BASIC29.95■■■□□ 2.39
SPDYE3A6NKU9 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC29.95■■■□□ 2.39
SPDYE3A6NKU9 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC29.95■■■□□ 2.39
SPDYE3A6NKU9 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC29.95■■■□□ 2.38
SPDYE3A6NKU9 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
SPDYE3A6NKU9 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC29.93■■■□□ 2.38
SPDYE3A6NKU9 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC29.93■■■□□ 2.38
SPDYE3A6NKU9 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC29.92■■■□□ 2.38
SPDYE3A6NKU9 ZNRF2P2-203ENST00000454624 420 ntBASIC29.91■■■□□ 2.38
SPDYE3A6NKU9 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC29.91■■■□□ 2.38
SPDYE3A6NKU9 EI24-212ENST00000615917 1407 ntTSL 2 BASIC29.89■■■□□ 2.38
SPDYE3A6NKU9 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC29.88■■■□□ 2.37
SPDYE3A6NKU9 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC29.87■■■□□ 2.37
SPDYE3A6NKU9 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC29.87■■■□□ 2.37
SPDYE3A6NKU9 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC29.87■■■□□ 2.37
SPDYE3A6NKU9 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC29.87■■■□□ 2.37
SPDYE3A6NKU9 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC29.87■■■□□ 2.37
SPDYE3A6NKU9 MIR7108-201ENST00000614319 87 ntBASIC29.87■■■□□ 2.37
SPDYE3A6NKU9 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC29.86■■■□□ 2.37
SPDYE3A6NKU9 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC29.85■■■□□ 2.37
SPDYE3A6NKU9 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC29.85■■■□□ 2.37
SPDYE3A6NKU9 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC29.84■■■□□ 2.37
SPDYE3A6NKU9 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC29.84■■■□□ 2.37
SPDYE3A6NKU9 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
SPDYE3A6NKU9 ST7-202ENST00000323984 2142 ntTSL 5 BASIC29.84■■■□□ 2.37
SPDYE3A6NKU9 ST7-207ENST00000393449 2127 ntTSL 5 BASIC29.84■■■□□ 2.37
SPDYE3A6NKU9 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC29.84■■■□□ 2.37
SPDYE3A6NKU9 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC29.83■■■□□ 2.37
SPDYE3A6NKU9 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.37
SPDYE3A6NKU9 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.37
SPDYE3A6NKU9 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC29.83■■■□□ 2.37
SPDYE3A6NKU9 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC29.82■■■□□ 2.36
SPDYE3A6NKU9 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC29.82■■■□□ 2.36
SPDYE3A6NKU9 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC29.82■■■□□ 2.36
SPDYE3A6NKU9 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC29.82■■■□□ 2.36
SPDYE3A6NKU9 ST7-AS1-201ENST00000456775 1889 ntBASIC29.8■■■□□ 2.36
SPDYE3A6NKU9 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
SPDYE3A6NKU9 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC29.8■■■□□ 2.36
SPDYE3A6NKU9 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC29.8■■■□□ 2.36
SPDYE3A6NKU9 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC29.8■■■□□ 2.36
SPDYE3A6NKU9 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC29.79■■■□□ 2.36
SPDYE3A6NKU9 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC29.79■■■□□ 2.36
SPDYE3A6NKU9 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC29.79■■■□□ 2.36
SPDYE3A6NKU9 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC29.79■■■□□ 2.36
SPDYE3A6NKU9 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
SPDYE3A6NKU9 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
SPDYE3A6NKU9 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC29.78■■■□□ 2.36
SPDYE3A6NKU9 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
SPDYE3A6NKU9 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
SPDYE3A6NKU9 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC29.77■■■□□ 2.36
SPDYE3A6NKU9 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
SPDYE3A6NKU9 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC29.77■■■□□ 2.36
SPDYE3A6NKU9 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
SPDYE3A6NKU9 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
SPDYE3A6NKU9 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC29.77■■■□□ 2.36
SPDYE3A6NKU9 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC29.76■■■□□ 2.36
SPDYE3A6NKU9 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.35
SPDYE3A6NKU9 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC29.75■■■□□ 2.35
SPDYE3A6NKU9 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
SPDYE3A6NKU9 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
Retrieved 100 of 98,524 protein–RNA pairs in 9.1 ms