Protein–RNA interactions for Protein: A0A1W2PRF3

Uncharacterized protein, humanhuman

Predictions only

Length 423 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
A0A1W2PRF3 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
A0A1W2PRF3 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
A0A1W2PRF3 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
A0A1W2PRF3 AC108673.1-201ENST00000510422 1159 ntBASIC21.52■■□□□ 1.04
A0A1W2PRF3 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC21.52■■□□□ 1.04
A0A1W2PRF3 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
A0A1W2PRF3 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
A0A1W2PRF3 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
A0A1W2PRF3 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC21.51■■□□□ 1.03
A0A1W2PRF3 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
A0A1W2PRF3 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
A0A1W2PRF3 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC21.5■■□□□ 1.03
A0A1W2PRF3 ABHD17AP4-201ENST00000411545 909 ntBASIC21.49■■□□□ 1.03
A0A1W2PRF3 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC21.49■■□□□ 1.03
A0A1W2PRF3 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC21.49■■□□□ 1.03
A0A1W2PRF3 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC21.49■■□□□ 1.03
A0A1W2PRF3 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC21.49■■□□□ 1.03
A0A1W2PRF3 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
A0A1W2PRF3 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
A0A1W2PRF3 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC21.48■■□□□ 1.03
A0A1W2PRF3 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC21.48■■□□□ 1.03
A0A1W2PRF3 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
A0A1W2PRF3 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC21.48■■□□□ 1.03
A0A1W2PRF3 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
A0A1W2PRF3 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
A0A1W2PRF3 MLEC-202ENST00000412616 841 ntTSL 3 BASIC21.47■■□□□ 1.03
A0A1W2PRF3 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
A0A1W2PRF3 DUX4L29-201ENST00000425409 679 ntBASIC21.46■■□□□ 1.03
A0A1W2PRF3 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
A0A1W2PRF3 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
A0A1W2PRF3 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
A0A1W2PRF3 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
A0A1W2PRF3 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
A0A1W2PRF3 ST7-205ENST00000393446 2114 ntTSL 5 BASIC21.44■■□□□ 1.02
A0A1W2PRF3 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC21.44■■□□□ 1.02
A0A1W2PRF3 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC21.43■■□□□ 1.02
A0A1W2PRF3 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC21.43■■□□□ 1.02
A0A1W2PRF3 AC021231.2-201ENST00000594613 730 ntBASIC21.43■■□□□ 1.02
A0A1W2PRF3 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
A0A1W2PRF3 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
A0A1W2PRF3 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
A0A1W2PRF3 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
A0A1W2PRF3 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC21.42■■□□□ 1.02
A0A1W2PRF3 AC010864.1-201ENST00000609407 1511 ntBASIC21.42■■□□□ 1.02
A0A1W2PRF3 HGH1-207ENST00000628266 258 ntTSL 5 BASIC21.42■■□□□ 1.02
A0A1W2PRF3 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC21.42■■□□□ 1.02
A0A1W2PRF3 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
A0A1W2PRF3 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC21.41■■□□□ 1.02
A0A1W2PRF3 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
A0A1W2PRF3 MIR7108-201ENST00000614319 87 ntBASIC21.4■■□□□ 1.02
A0A1W2PRF3 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
A0A1W2PRF3 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
A0A1W2PRF3 PVT1-219ENST00000523427 938 ntTSL 3 BASIC21.39■■□□□ 1.01
A0A1W2PRF3 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
A0A1W2PRF3 ZNRF2P2-203ENST00000454624 420 ntBASIC21.38■■□□□ 1.01
A0A1W2PRF3 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
A0A1W2PRF3 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
A0A1W2PRF3 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
A0A1W2PRF3 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC21.37■■□□□ 1.01
A0A1W2PRF3 AL135925.1-201ENST00000605920 1701 ntBASIC21.37■■□□□ 1.01
A0A1W2PRF3 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC21.37■■□□□ 1.01
A0A1W2PRF3 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
A0A1W2PRF3 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
A0A1W2PRF3 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
A0A1W2PRF3 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
A0A1W2PRF3 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC21.35■■□□□ 1.01
A0A1W2PRF3 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
A0A1W2PRF3 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
A0A1W2PRF3 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
A0A1W2PRF3 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
A0A1W2PRF3 ST7-202ENST00000323984 2142 ntTSL 5 BASIC21.34■■□□□ 1.01
A0A1W2PRF3 ST7-207ENST00000393449 2127 ntTSL 5 BASIC21.34■■□□□ 1.01
A0A1W2PRF3 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
A0A1W2PRF3 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
A0A1W2PRF3 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
A0A1W2PRF3 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC21.33■■□□□ 1.01
A0A1W2PRF3 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
A0A1W2PRF3 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC21.32■■□□□ 1
A0A1W2PRF3 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC21.32■■□□□ 1
A0A1W2PRF3 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC21.32■■□□□ 1
A0A1W2PRF3 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC21.31■■□□□ 1
A0A1W2PRF3 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
A0A1W2PRF3 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC21.31■■□□□ 1
A0A1W2PRF3 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC21.31■■□□□ 1
A0A1W2PRF3 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC21.3■■□□□ 1
A0A1W2PRF3 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC21.3■■□□□ 1
A0A1W2PRF3 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
A0A1W2PRF3 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
A0A1W2PRF3 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
A0A1W2PRF3 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC21.29■■□□□ 1
A0A1W2PRF3 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
A0A1W2PRF3 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
A0A1W2PRF3 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC21.28■■□□□ 1
A0A1W2PRF3 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
A0A1W2PRF3 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC21.26■□□□□ 0.99
A0A1W2PRF3 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
A0A1W2PRF3 EI24-212ENST00000615917 1407 ntTSL 2 BASIC21.26■□□□□ 0.99
A0A1W2PRF3 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC21.26■□□□□ 0.99
A0A1W2PRF3 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
A0A1W2PRF3 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms