Protein–RNA interactions for Protein: A0A1B0GVL6

TMEM238L, HCG1800530, isoform CRA_b, humanhuman

Predictions only

Length 79 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM238LA0A1B0GVL6 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
TMEM238LA0A1B0GVL6 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TMEM238LA0A1B0GVL6 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TMEM238LA0A1B0GVL6 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TMEM238LA0A1B0GVL6 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TMEM238LA0A1B0GVL6 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
TMEM238LA0A1B0GVL6 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC18.4■□□□□ 0.54
TMEM238LA0A1B0GVL6 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TMEM238LA0A1B0GVL6 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TMEM238LA0A1B0GVL6 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TMEM238LA0A1B0GVL6 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC18.39■□□□□ 0.53
TMEM238LA0A1B0GVL6 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC18.39■□□□□ 0.53
TMEM238LA0A1B0GVL6 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
TMEM238LA0A1B0GVL6 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC18.38■□□□□ 0.53
TMEM238LA0A1B0GVL6 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TMEM238LA0A1B0GVL6 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TMEM238LA0A1B0GVL6 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC18.38■□□□□ 0.53
TMEM238LA0A1B0GVL6 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TMEM238LA0A1B0GVL6 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC18.38■□□□□ 0.53
TMEM238LA0A1B0GVL6 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TMEM238LA0A1B0GVL6 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TMEM238LA0A1B0GVL6 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TMEM238LA0A1B0GVL6 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
TMEM238LA0A1B0GVL6 AC120057.4-201ENST00000624722 1615 ntBASIC18.36■□□□□ 0.53
TMEM238LA0A1B0GVL6 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
TMEM238LA0A1B0GVL6 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TMEM238LA0A1B0GVL6 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC18.34■□□□□ 0.53
TMEM238LA0A1B0GVL6 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC18.34■□□□□ 0.53
TMEM238LA0A1B0GVL6 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
TMEM238LA0A1B0GVL6 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.52
TMEM238LA0A1B0GVL6 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TMEM238LA0A1B0GVL6 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
TMEM238LA0A1B0GVL6 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TMEM238LA0A1B0GVL6 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TMEM238LA0A1B0GVL6 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
TMEM238LA0A1B0GVL6 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TMEM238LA0A1B0GVL6 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TMEM238LA0A1B0GVL6 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TMEM238LA0A1B0GVL6 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TMEM238LA0A1B0GVL6 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TMEM238LA0A1B0GVL6 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
TMEM238LA0A1B0GVL6 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TMEM238LA0A1B0GVL6 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TMEM238LA0A1B0GVL6 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TMEM238LA0A1B0GVL6 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TMEM238LA0A1B0GVL6 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TMEM238LA0A1B0GVL6 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TMEM238LA0A1B0GVL6 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TMEM238LA0A1B0GVL6 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TMEM238LA0A1B0GVL6 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC18.29■□□□□ 0.52
TMEM238LA0A1B0GVL6 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TMEM238LA0A1B0GVL6 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
TMEM238LA0A1B0GVL6 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TMEM238LA0A1B0GVL6 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TMEM238LA0A1B0GVL6 AL121749.1-202ENST00000609313 2153 ntBASIC18.27■□□□□ 0.52
TMEM238LA0A1B0GVL6 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
TMEM238LA0A1B0GVL6 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
TMEM238LA0A1B0GVL6 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC18.27■□□□□ 0.52
TMEM238LA0A1B0GVL6 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC18.27■□□□□ 0.51
TMEM238LA0A1B0GVL6 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC18.27■□□□□ 0.51
TMEM238LA0A1B0GVL6 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
TMEM238LA0A1B0GVL6 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TMEM238LA0A1B0GVL6 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TMEM238LA0A1B0GVL6 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TMEM238LA0A1B0GVL6 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
TMEM238LA0A1B0GVL6 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC18.25■□□□□ 0.51
TMEM238LA0A1B0GVL6 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TMEM238LA0A1B0GVL6 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TMEM238LA0A1B0GVL6 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
TMEM238LA0A1B0GVL6 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TMEM238LA0A1B0GVL6 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
TMEM238LA0A1B0GVL6 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TMEM238LA0A1B0GVL6 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC18.24■□□□□ 0.51
TMEM238LA0A1B0GVL6 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC18.24■□□□□ 0.51
TMEM238LA0A1B0GVL6 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC18.24■□□□□ 0.51
TMEM238LA0A1B0GVL6 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TMEM238LA0A1B0GVL6 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC18.24■□□□□ 0.51
TMEM238LA0A1B0GVL6 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
TMEM238LA0A1B0GVL6 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC18.22■□□□□ 0.51
TMEM238LA0A1B0GVL6 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TMEM238LA0A1B0GVL6 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TMEM238LA0A1B0GVL6 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TMEM238LA0A1B0GVL6 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC18.2■□□□□ 0.5
TMEM238LA0A1B0GVL6 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TMEM238LA0A1B0GVL6 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
TMEM238LA0A1B0GVL6 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TMEM238LA0A1B0GVL6 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
TMEM238LA0A1B0GVL6 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TMEM238LA0A1B0GVL6 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TMEM238LA0A1B0GVL6 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TMEM238LA0A1B0GVL6 ST7-AS1-201ENST00000456775 1889 ntBASIC18.18■□□□□ 0.5
TMEM238LA0A1B0GVL6 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TMEM238LA0A1B0GVL6 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
TMEM238LA0A1B0GVL6 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TMEM238LA0A1B0GVL6 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TMEM238LA0A1B0GVL6 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
TMEM238LA0A1B0GVL6 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
TMEM238LA0A1B0GVL6 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TMEM238LA0A1B0GVL6 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
TMEM238LA0A1B0GVL6 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms