Protein–RNA interactions for Protein: A0A0K0K1C0

TRBV11-1, T-cell receptor beta variable 11-1 (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV11-1A0A0K0K1C0 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC24.45■■□□□ 1.51
TRBV11-1A0A0K0K1C0 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC24.45■■□□□ 1.5
TRBV11-1A0A0K0K1C0 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC24.45■■□□□ 1.5
TRBV11-1A0A0K0K1C0 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
TRBV11-1A0A0K0K1C0 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC24.44■■□□□ 1.5
TRBV11-1A0A0K0K1C0 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC24.44■■□□□ 1.5
TRBV11-1A0A0K0K1C0 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC24.44■■□□□ 1.5
TRBV11-1A0A0K0K1C0 ABHD17AP4-201ENST00000411545 909 ntBASIC24.44■■□□□ 1.5
TRBV11-1A0A0K0K1C0 DUX4L29-201ENST00000425409 679 ntBASIC24.44■■□□□ 1.5
TRBV11-1A0A0K0K1C0 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
TRBV11-1A0A0K0K1C0 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC24.44■■□□□ 1.5
TRBV11-1A0A0K0K1C0 AC010864.1-201ENST00000609407 1511 ntBASIC24.43■■□□□ 1.5
TRBV11-1A0A0K0K1C0 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC24.42■■□□□ 1.5
TRBV11-1A0A0K0K1C0 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
TRBV11-1A0A0K0K1C0 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
TRBV11-1A0A0K0K1C0 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
TRBV11-1A0A0K0K1C0 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC24.4■■□□□ 1.5
TRBV11-1A0A0K0K1C0 HGH1-207ENST00000628266 258 ntTSL 5 BASIC24.4■■□□□ 1.5
TRBV11-1A0A0K0K1C0 AC021231.2-201ENST00000594613 730 ntBASIC24.39■■□□□ 1.49
TRBV11-1A0A0K0K1C0 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
TRBV11-1A0A0K0K1C0 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC24.38■■□□□ 1.49
TRBV11-1A0A0K0K1C0 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
TRBV11-1A0A0K0K1C0 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
TRBV11-1A0A0K0K1C0 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC24.37■■□□□ 1.49
TRBV11-1A0A0K0K1C0 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC24.37■■□□□ 1.49
TRBV11-1A0A0K0K1C0 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
TRBV11-1A0A0K0K1C0 AL135925.1-201ENST00000605920 1701 ntBASIC24.36■■□□□ 1.49
TRBV11-1A0A0K0K1C0 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
TRBV11-1A0A0K0K1C0 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
TRBV11-1A0A0K0K1C0 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
TRBV11-1A0A0K0K1C0 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
TRBV11-1A0A0K0K1C0 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
TRBV11-1A0A0K0K1C0 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC24.35■■□□□ 1.49
TRBV11-1A0A0K0K1C0 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
TRBV11-1A0A0K0K1C0 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC24.34■■□□□ 1.49
TRBV11-1A0A0K0K1C0 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
TRBV11-1A0A0K0K1C0 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
TRBV11-1A0A0K0K1C0 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
TRBV11-1A0A0K0K1C0 ZNRF2P2-203ENST00000454624 420 ntBASIC24.33■■□□□ 1.49
TRBV11-1A0A0K0K1C0 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.48
TRBV11-1A0A0K0K1C0 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
TRBV11-1A0A0K0K1C0 MIR7108-201ENST00000614319 87 ntBASIC24.32■■□□□ 1.48
TRBV11-1A0A0K0K1C0 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC24.32■■□□□ 1.48
TRBV11-1A0A0K0K1C0 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC24.32■■□□□ 1.48
TRBV11-1A0A0K0K1C0 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC24.32■■□□□ 1.48
TRBV11-1A0A0K0K1C0 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
TRBV11-1A0A0K0K1C0 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
TRBV11-1A0A0K0K1C0 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
TRBV11-1A0A0K0K1C0 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC24.3■■□□□ 1.48
TRBV11-1A0A0K0K1C0 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC24.3■■□□□ 1.48
TRBV11-1A0A0K0K1C0 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC24.29■■□□□ 1.48
TRBV11-1A0A0K0K1C0 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC24.29■■□□□ 1.48
TRBV11-1A0A0K0K1C0 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC24.29■■□□□ 1.48
TRBV11-1A0A0K0K1C0 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
TRBV11-1A0A0K0K1C0 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
TRBV11-1A0A0K0K1C0 EI24-212ENST00000615917 1407 ntTSL 2 BASIC24.27■■□□□ 1.48
TRBV11-1A0A0K0K1C0 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC24.27■■□□□ 1.48
TRBV11-1A0A0K0K1C0 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC24.27■■□□□ 1.48
TRBV11-1A0A0K0K1C0 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC24.27■■□□□ 1.48
TRBV11-1A0A0K0K1C0 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC24.27■■□□□ 1.48
TRBV11-1A0A0K0K1C0 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC24.26■■□□□ 1.47
TRBV11-1A0A0K0K1C0 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC24.26■■□□□ 1.47
TRBV11-1A0A0K0K1C0 ST7-205ENST00000393446 2114 ntTSL 5 BASIC24.26■■□□□ 1.47
TRBV11-1A0A0K0K1C0 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC24.23■■□□□ 1.47
TRBV11-1A0A0K0K1C0 PVT1-219ENST00000523427 938 ntTSL 3 BASIC24.23■■□□□ 1.47
TRBV11-1A0A0K0K1C0 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC24.23■■□□□ 1.47
TRBV11-1A0A0K0K1C0 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
TRBV11-1A0A0K0K1C0 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
TRBV11-1A0A0K0K1C0 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
TRBV11-1A0A0K0K1C0 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC24.21■■□□□ 1.47
TRBV11-1A0A0K0K1C0 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
TRBV11-1A0A0K0K1C0 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
TRBV11-1A0A0K0K1C0 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
TRBV11-1A0A0K0K1C0 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
TRBV11-1A0A0K0K1C0 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC24.2■■□□□ 1.46
TRBV11-1A0A0K0K1C0 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC24.2■■□□□ 1.46
TRBV11-1A0A0K0K1C0 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
TRBV11-1A0A0K0K1C0 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
TRBV11-1A0A0K0K1C0 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC24.19■■□□□ 1.46
TRBV11-1A0A0K0K1C0 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
TRBV11-1A0A0K0K1C0 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC24.18■■□□□ 1.46
TRBV11-1A0A0K0K1C0 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC24.17■■□□□ 1.46
TRBV11-1A0A0K0K1C0 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
TRBV11-1A0A0K0K1C0 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
TRBV11-1A0A0K0K1C0 ST7-202ENST00000323984 2142 ntTSL 5 BASIC24.17■■□□□ 1.46
TRBV11-1A0A0K0K1C0 ST7-207ENST00000393449 2127 ntTSL 5 BASIC24.17■■□□□ 1.46
TRBV11-1A0A0K0K1C0 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
TRBV11-1A0A0K0K1C0 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC24.17■■□□□ 1.46
TRBV11-1A0A0K0K1C0 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
TRBV11-1A0A0K0K1C0 ST7-AS1-201ENST00000456775 1889 ntBASIC24.16■■□□□ 1.46
TRBV11-1A0A0K0K1C0 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC24.16■■□□□ 1.46
TRBV11-1A0A0K0K1C0 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
TRBV11-1A0A0K0K1C0 AC127502.1-201ENST00000399971 1502 ntBASIC24.15■■□□□ 1.46
TRBV11-1A0A0K0K1C0 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC24.15■■□□□ 1.46
TRBV11-1A0A0K0K1C0 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC24.15■■□□□ 1.46
TRBV11-1A0A0K0K1C0 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC24.15■■□□□ 1.46
TRBV11-1A0A0K0K1C0 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC24.14■■□□□ 1.46
TRBV11-1A0A0K0K1C0 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC24.14■■□□□ 1.46
TRBV11-1A0A0K0K1C0 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC24.14■■□□□ 1.46
TRBV11-1A0A0K0K1C0 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms