Protein–RNA interactions for Protein: A0A0A6YYG3

TRBV6-8, T-cell receptor beta variable 6-8 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-8A0A0A6YYG3 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC18.23■□□□□ 0.51
TRBV6-8A0A0A6YYG3 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRBV6-8A0A0A6YYG3 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
TRBV6-8A0A0A6YYG3 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
TRBV6-8A0A0A6YYG3 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRBV6-8A0A0A6YYG3 AC010864.1-201ENST00000609407 1511 ntBASIC18.23■□□□□ 0.51
TRBV6-8A0A0A6YYG3 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC18.22■□□□□ 0.51
TRBV6-8A0A0A6YYG3 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRBV6-8A0A0A6YYG3 EBPL-202ENST00000378268 680 ntTSL 3 BASIC18.21■□□□□ 0.51
TRBV6-8A0A0A6YYG3 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TRBV6-8A0A0A6YYG3 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRBV6-8A0A0A6YYG3 AL391121.1-201ENST00000607967 1349 ntBASIC18.21■□□□□ 0.51
TRBV6-8A0A0A6YYG3 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
TRBV6-8A0A0A6YYG3 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC18.2■□□□□ 0.5
TRBV6-8A0A0A6YYG3 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC18.2■□□□□ 0.5
TRBV6-8A0A0A6YYG3 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC18.2■□□□□ 0.5
TRBV6-8A0A0A6YYG3 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRBV6-8A0A0A6YYG3 DENR-202ENST00000455982 1052 ntTSL 5 BASIC18.19■□□□□ 0.5
TRBV6-8A0A0A6YYG3 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC18.19■□□□□ 0.5
TRBV6-8A0A0A6YYG3 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
TRBV6-8A0A0A6YYG3 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRBV6-8A0A0A6YYG3 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRBV6-8A0A0A6YYG3 AC097358.2-201ENST00000607541 1159 ntBASIC18.18■□□□□ 0.5
TRBV6-8A0A0A6YYG3 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TRBV6-8A0A0A6YYG3 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRBV6-8A0A0A6YYG3 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRBV6-8A0A0A6YYG3 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TRBV6-8A0A0A6YYG3 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRBV6-8A0A0A6YYG3 AC136428.2-201ENST00000563187 214 ntBASIC18.16■□□□□ 0.5
TRBV6-8A0A0A6YYG3 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
TRBV6-8A0A0A6YYG3 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRBV6-8A0A0A6YYG3 AL139393.2-201ENST00000608721 2025 ntBASIC18.16■□□□□ 0.5
TRBV6-8A0A0A6YYG3 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRBV6-8A0A0A6YYG3 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
TRBV6-8A0A0A6YYG3 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRBV6-8A0A0A6YYG3 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TRBV6-8A0A0A6YYG3 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TRBV6-8A0A0A6YYG3 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC18.15■□□□□ 0.5
TRBV6-8A0A0A6YYG3 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TRBV6-8A0A0A6YYG3 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC18.14■□□□□ 0.49
TRBV6-8A0A0A6YYG3 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
TRBV6-8A0A0A6YYG3 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRBV6-8A0A0A6YYG3 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC18.14■□□□□ 0.49
TRBV6-8A0A0A6YYG3 CAHM-201ENST00000604200 896 ntBASIC18.14■□□□□ 0.49
TRBV6-8A0A0A6YYG3 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRBV6-8A0A0A6YYG3 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
TRBV6-8A0A0A6YYG3 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRBV6-8A0A0A6YYG3 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRBV6-8A0A0A6YYG3 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRBV6-8A0A0A6YYG3 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRBV6-8A0A0A6YYG3 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRBV6-8A0A0A6YYG3 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRBV6-8A0A0A6YYG3 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRBV6-8A0A0A6YYG3 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
TRBV6-8A0A0A6YYG3 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRBV6-8A0A0A6YYG3 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC18.12■□□□□ 0.49
TRBV6-8A0A0A6YYG3 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC18.11■□□□□ 0.49
TRBV6-8A0A0A6YYG3 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC18.11■□□□□ 0.49
TRBV6-8A0A0A6YYG3 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRBV6-8A0A0A6YYG3 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC18.1■□□□□ 0.49
TRBV6-8A0A0A6YYG3 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TRBV6-8A0A0A6YYG3 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRBV6-8A0A0A6YYG3 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
TRBV6-8A0A0A6YYG3 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
TRBV6-8A0A0A6YYG3 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
TRBV6-8A0A0A6YYG3 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
TRBV6-8A0A0A6YYG3 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
TRBV6-8A0A0A6YYG3 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
TRBV6-8A0A0A6YYG3 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
TRBV6-8A0A0A6YYG3 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRBV6-8A0A0A6YYG3 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRBV6-8A0A0A6YYG3 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRBV6-8A0A0A6YYG3 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
TRBV6-8A0A0A6YYG3 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRBV6-8A0A0A6YYG3 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC18.05■□□□□ 0.48
TRBV6-8A0A0A6YYG3 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC18.05■□□□□ 0.48
TRBV6-8A0A0A6YYG3 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRBV6-8A0A0A6YYG3 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC18.04■□□□□ 0.48
TRBV6-8A0A0A6YYG3 AC142086.6-201ENST00000621154 1765 ntBASIC18.04■□□□□ 0.48
TRBV6-8A0A0A6YYG3 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRBV6-8A0A0A6YYG3 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
TRBV6-8A0A0A6YYG3 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC18.03■□□□□ 0.48
TRBV6-8A0A0A6YYG3 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TRBV6-8A0A0A6YYG3 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC18.02■□□□□ 0.48
TRBV6-8A0A0A6YYG3 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
TRBV6-8A0A0A6YYG3 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC18.02■□□□□ 0.48
TRBV6-8A0A0A6YYG3 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC18.02■□□□□ 0.48
TRBV6-8A0A0A6YYG3 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC18.02■□□□□ 0.48
TRBV6-8A0A0A6YYG3 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC18.02■□□□□ 0.47
TRBV6-8A0A0A6YYG3 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC18■□□□□ 0.47
TRBV6-8A0A0A6YYG3 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC18■□□□□ 0.47
TRBV6-8A0A0A6YYG3 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC18■□□□□ 0.47
TRBV6-8A0A0A6YYG3 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TRBV6-8A0A0A6YYG3 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC18■□□□□ 0.47
TRBV6-8A0A0A6YYG3 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
TRBV6-8A0A0A6YYG3 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
TRBV6-8A0A0A6YYG3 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRBV6-8A0A0A6YYG3 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRBV6-8A0A0A6YYG3 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRBV6-8A0A0A6YYG3 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 13.3 ms