Protein–RNA interactions for Protein: A0A075B6T7

TRAV6, T-cell receptor alpha variable 6 (Fragment), humanhuman

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV6A0A075B6T7 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.19
TRAV6A0A075B6T7 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC22.51■■□□□ 1.19
TRAV6A0A075B6T7 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC22.51■■□□□ 1.19
TRAV6A0A075B6T7 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC22.51■■□□□ 1.19
TRAV6A0A075B6T7 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC22.51■■□□□ 1.19
TRAV6A0A075B6T7 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC22.51■■□□□ 1.19
TRAV6A0A075B6T7 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
TRAV6A0A075B6T7 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
TRAV6A0A075B6T7 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
TRAV6A0A075B6T7 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
TRAV6A0A075B6T7 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
TRAV6A0A075B6T7 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC22.49■■□□□ 1.19
TRAV6A0A075B6T7 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC22.49■■□□□ 1.19
TRAV6A0A075B6T7 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
TRAV6A0A075B6T7 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
TRAV6A0A075B6T7 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC22.48■■□□□ 1.19
TRAV6A0A075B6T7 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
TRAV6A0A075B6T7 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC22.48■■□□□ 1.19
TRAV6A0A075B6T7 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC22.48■■□□□ 1.19
TRAV6A0A075B6T7 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC22.47■■□□□ 1.19
TRAV6A0A075B6T7 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC22.47■■□□□ 1.19
TRAV6A0A075B6T7 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC22.47■■□□□ 1.19
TRAV6A0A075B6T7 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC22.47■■□□□ 1.19
TRAV6A0A075B6T7 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
TRAV6A0A075B6T7 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC22.47■■□□□ 1.19
TRAV6A0A075B6T7 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
TRAV6A0A075B6T7 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
TRAV6A0A075B6T7 AL135925.1-201ENST00000605920 1701 ntBASIC22.45■■□□□ 1.19
TRAV6A0A075B6T7 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.19
TRAV6A0A075B6T7 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC22.45■■□□□ 1.18
TRAV6A0A075B6T7 AC015813.7-201ENST00000623294 581 ntBASIC22.45■■□□□ 1.18
TRAV6A0A075B6T7 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
TRAV6A0A075B6T7 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC22.45■■□□□ 1.18
TRAV6A0A075B6T7 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC22.44■■□□□ 1.18
TRAV6A0A075B6T7 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC22.44■■□□□ 1.18
TRAV6A0A075B6T7 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC22.43■■□□□ 1.18
TRAV6A0A075B6T7 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC22.43■■□□□ 1.18
TRAV6A0A075B6T7 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
TRAV6A0A075B6T7 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC22.43■■□□□ 1.18
TRAV6A0A075B6T7 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC22.41■■□□□ 1.18
TRAV6A0A075B6T7 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC22.4■■□□□ 1.18
TRAV6A0A075B6T7 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
TRAV6A0A075B6T7 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
TRAV6A0A075B6T7 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
TRAV6A0A075B6T7 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
TRAV6A0A075B6T7 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
TRAV6A0A075B6T7 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC22.38■■□□□ 1.17
TRAV6A0A075B6T7 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC22.38■■□□□ 1.17
TRAV6A0A075B6T7 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC22.38■■□□□ 1.17
TRAV6A0A075B6T7 AL139393.2-201ENST00000608721 2025 ntBASIC22.38■■□□□ 1.17
TRAV6A0A075B6T7 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
TRAV6A0A075B6T7 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC22.35■■□□□ 1.17
TRAV6A0A075B6T7 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC22.35■■□□□ 1.17
TRAV6A0A075B6T7 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
TRAV6A0A075B6T7 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
TRAV6A0A075B6T7 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC22.35■■□□□ 1.17
TRAV6A0A075B6T7 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
TRAV6A0A075B6T7 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC22.34■■□□□ 1.17
TRAV6A0A075B6T7 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
TRAV6A0A075B6T7 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
TRAV6A0A075B6T7 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
TRAV6A0A075B6T7 PKM-204ENST00000449901 2526 ntTSL 2 BASIC22.33■■□□□ 1.17
TRAV6A0A075B6T7 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
TRAV6A0A075B6T7 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC22.32■■□□□ 1.16
TRAV6A0A075B6T7 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC22.32■■□□□ 1.16
TRAV6A0A075B6T7 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
TRAV6A0A075B6T7 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
TRAV6A0A075B6T7 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
TRAV6A0A075B6T7 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
TRAV6A0A075B6T7 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
TRAV6A0A075B6T7 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
TRAV6A0A075B6T7 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC22.29■■□□□ 1.16
TRAV6A0A075B6T7 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC22.29■■□□□ 1.16
TRAV6A0A075B6T7 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC22.28■■□□□ 1.16
TRAV6A0A075B6T7 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC22.27■■□□□ 1.16
TRAV6A0A075B6T7 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
TRAV6A0A075B6T7 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC22.27■■□□□ 1.15
TRAV6A0A075B6T7 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
TRAV6A0A075B6T7 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC22.25■■□□□ 1.15
TRAV6A0A075B6T7 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC22.25■■□□□ 1.15
TRAV6A0A075B6T7 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
TRAV6A0A075B6T7 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
TRAV6A0A075B6T7 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
TRAV6A0A075B6T7 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
TRAV6A0A075B6T7 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
TRAV6A0A075B6T7 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
TRAV6A0A075B6T7 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
TRAV6A0A075B6T7 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
TRAV6A0A075B6T7 AL449106.1-201ENST00000608517 1980 ntBASIC22.23■■□□□ 1.15
TRAV6A0A075B6T7 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
TRAV6A0A075B6T7 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
TRAV6A0A075B6T7 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
TRAV6A0A075B6T7 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC22.21■■□□□ 1.15
TRAV6A0A075B6T7 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC22.21■■□□□ 1.15
TRAV6A0A075B6T7 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC22.2■■□□□ 1.15
TRAV6A0A075B6T7 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC22.2■■□□□ 1.14
TRAV6A0A075B6T7 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC22.2■■□□□ 1.14
TRAV6A0A075B6T7 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC22.19■■□□□ 1.14
TRAV6A0A075B6T7 MVK-208ENST00000539696 608 ntTSL 5 BASIC22.19■■□□□ 1.14
TRAV6A0A075B6T7 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms