Protein–RNA interactions for Protein: A0A075B6M9

TRBV23OR9-2, T-cell receptor beta variable 23/OR9-2 (pseudogene) (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV23OR9-2A0A075B6M9 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC25.77■■□□□ 1.72
TRBV23OR9-2A0A075B6M9 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC25.77■■□□□ 1.72
TRBV23OR9-2A0A075B6M9 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
TRBV23OR9-2A0A075B6M9 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC25.77■■□□□ 1.72
TRBV23OR9-2A0A075B6M9 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC25.76■■□□□ 1.72
TRBV23OR9-2A0A075B6M9 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
TRBV23OR9-2A0A075B6M9 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
TRBV23OR9-2A0A075B6M9 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC25.76■■□□□ 1.71
TRBV23OR9-2A0A075B6M9 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
TRBV23OR9-2A0A075B6M9 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
TRBV23OR9-2A0A075B6M9 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
TRBV23OR9-2A0A075B6M9 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
TRBV23OR9-2A0A075B6M9 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC25.73■■□□□ 1.71
TRBV23OR9-2A0A075B6M9 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
TRBV23OR9-2A0A075B6M9 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
TRBV23OR9-2A0A075B6M9 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
TRBV23OR9-2A0A075B6M9 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC25.72■■□□□ 1.71
TRBV23OR9-2A0A075B6M9 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC25.71■■□□□ 1.71
TRBV23OR9-2A0A075B6M9 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
TRBV23OR9-2A0A075B6M9 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
TRBV23OR9-2A0A075B6M9 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC25.7■■□□□ 1.7
TRBV23OR9-2A0A075B6M9 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
TRBV23OR9-2A0A075B6M9 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC25.69■■□□□ 1.7
TRBV23OR9-2A0A075B6M9 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
TRBV23OR9-2A0A075B6M9 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
TRBV23OR9-2A0A075B6M9 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC25.67■■□□□ 1.7
TRBV23OR9-2A0A075B6M9 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC25.67■■□□□ 1.7
TRBV23OR9-2A0A075B6M9 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC25.67■■□□□ 1.7
TRBV23OR9-2A0A075B6M9 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC25.67■■□□□ 1.7
TRBV23OR9-2A0A075B6M9 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
TRBV23OR9-2A0A075B6M9 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC25.66■■□□□ 1.7
TRBV23OR9-2A0A075B6M9 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC25.66■■□□□ 1.7
TRBV23OR9-2A0A075B6M9 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC25.65■■□□□ 1.7
TRBV23OR9-2A0A075B6M9 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
TRBV23OR9-2A0A075B6M9 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
TRBV23OR9-2A0A075B6M9 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC25.64■■□□□ 1.69
TRBV23OR9-2A0A075B6M9 AC010864.1-201ENST00000609407 1511 ntBASIC25.63■■□□□ 1.69
TRBV23OR9-2A0A075B6M9 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC25.63■■□□□ 1.69
TRBV23OR9-2A0A075B6M9 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC25.62■■□□□ 1.69
TRBV23OR9-2A0A075B6M9 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC25.62■■□□□ 1.69
TRBV23OR9-2A0A075B6M9 MBP-237ENST00000579129 1052 ntTSL 5 BASIC25.62■■□□□ 1.69
TRBV23OR9-2A0A075B6M9 HLA-V-202ENST00000446817 847 ntBASIC25.61■■□□□ 1.69
TRBV23OR9-2A0A075B6M9 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
TRBV23OR9-2A0A075B6M9 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
TRBV23OR9-2A0A075B6M9 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
TRBV23OR9-2A0A075B6M9 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
TRBV23OR9-2A0A075B6M9 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC25.58■■□□□ 1.69
TRBV23OR9-2A0A075B6M9 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
TRBV23OR9-2A0A075B6M9 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC25.57■■□□□ 1.68
TRBV23OR9-2A0A075B6M9 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
TRBV23OR9-2A0A075B6M9 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
TRBV23OR9-2A0A075B6M9 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC25.56■■□□□ 1.68
TRBV23OR9-2A0A075B6M9 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC25.55■■□□□ 1.68
TRBV23OR9-2A0A075B6M9 EI24-212ENST00000615917 1407 ntTSL 2 BASIC25.54■■□□□ 1.68
TRBV23OR9-2A0A075B6M9 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC25.54■■□□□ 1.68
TRBV23OR9-2A0A075B6M9 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC25.54■■□□□ 1.68
TRBV23OR9-2A0A075B6M9 AL135925.1-201ENST00000605920 1701 ntBASIC25.52■■□□□ 1.68
TRBV23OR9-2A0A075B6M9 RNF166-209ENST00000567844 633 ntTSL 5 BASIC25.52■■□□□ 1.68
TRBV23OR9-2A0A075B6M9 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
TRBV23OR9-2A0A075B6M9 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
TRBV23OR9-2A0A075B6M9 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
TRBV23OR9-2A0A075B6M9 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC25.51■■□□□ 1.67
TRBV23OR9-2A0A075B6M9 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
TRBV23OR9-2A0A075B6M9 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
TRBV23OR9-2A0A075B6M9 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC25.49■■□□□ 1.67
TRBV23OR9-2A0A075B6M9 DUX4L11-201ENST00000611504 1267 ntBASIC25.49■■□□□ 1.67
TRBV23OR9-2A0A075B6M9 DUX4L12-201ENST00000614593 1267 ntBASIC25.49■■□□□ 1.67
TRBV23OR9-2A0A075B6M9 DUX4L14-201ENST00000621227 1267 ntBASIC25.49■■□□□ 1.67
TRBV23OR9-2A0A075B6M9 RPS2-202ENST00000526522 924 ntTSL 2 BASIC25.48■■□□□ 1.67
TRBV23OR9-2A0A075B6M9 LINC01971-201ENST00000617888 1048 ntBASIC25.47■■□□□ 1.67
TRBV23OR9-2A0A075B6M9 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC25.47■■□□□ 1.67
TRBV23OR9-2A0A075B6M9 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC25.47■■□□□ 1.67
TRBV23OR9-2A0A075B6M9 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC25.46■■□□□ 1.67
TRBV23OR9-2A0A075B6M9 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC25.46■■□□□ 1.67
TRBV23OR9-2A0A075B6M9 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
TRBV23OR9-2A0A075B6M9 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC25.45■■□□□ 1.66
TRBV23OR9-2A0A075B6M9 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC25.45■■□□□ 1.66
TRBV23OR9-2A0A075B6M9 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
TRBV23OR9-2A0A075B6M9 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC25.44■■□□□ 1.66
TRBV23OR9-2A0A075B6M9 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC25.44■■□□□ 1.66
TRBV23OR9-2A0A075B6M9 AC016575.1-201ENST00000607026 382 ntBASIC25.44■■□□□ 1.66
TRBV23OR9-2A0A075B6M9 GDI1-215ENST00000630693 786 ntTSL 4 BASIC25.44■■□□□ 1.66
TRBV23OR9-2A0A075B6M9 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
TRBV23OR9-2A0A075B6M9 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
TRBV23OR9-2A0A075B6M9 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
TRBV23OR9-2A0A075B6M9 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC25.43■■□□□ 1.66
TRBV23OR9-2A0A075B6M9 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
TRBV23OR9-2A0A075B6M9 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
TRBV23OR9-2A0A075B6M9 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC25.42■■□□□ 1.66
TRBV23OR9-2A0A075B6M9 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC25.42■■□□□ 1.66
TRBV23OR9-2A0A075B6M9 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
TRBV23OR9-2A0A075B6M9 MIR3648-2-201ENST00000581792 180 ntBASIC25.42■■□□□ 1.66
TRBV23OR9-2A0A075B6M9 CALM3-209ENST00000597743 577 ntTSL 4 BASIC25.42■■□□□ 1.66
TRBV23OR9-2A0A075B6M9 MIR3648-1-201ENST00000615959 180 ntBASIC25.42■■□□□ 1.66
TRBV23OR9-2A0A075B6M9 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
TRBV23OR9-2A0A075B6M9 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
TRBV23OR9-2A0A075B6M9 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
TRBV23OR9-2A0A075B6M9 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC25.4■■□□□ 1.66
TRBV23OR9-2A0A075B6M9 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC25.4■■□□□ 1.66
TRBV23OR9-2A0A075B6M9 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
Retrieved 100 of 98,524 protein–RNA pairs in 10.1 ms