Protein–RNA interactions for Protein: O95155

UBE4B, Ubiquitin conjugation factor E4 B, humanhuman

Predictions only

Length 1,302 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4BO95155 COPB2-201ENST00000333188 3360 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
UBE4BO95155 CSMD2-205ENST00000373381 13698 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
UBE4BO95155 LINC01886-202ENST00000443205 1539 ntTSL 3 BASIC9.62□□□□□ -0.87
UBE4BO95155 NRP1-212ENST00000432372 4137 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
UBE4BO95155 HSPA9P1-201ENST00000432228 2029 ntBASIC9.62□□□□□ -0.87
UBE4BO95155 SYTL4-202ENST00000276141 3737 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
UBE4BO95155 MCM8-204ENST00000378896 3769 ntAPPRIS P4 TSL 1 (best) BASIC9.62□□□□□ -0.87
UBE4BO95155 TSC22D1-201ENST00000261489 3135 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
UBE4BO95155 ADGRF1-202ENST00000371243 1370 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
UBE4BO95155 RPEL1-201ENST00000441178 2130 ntAPPRIS P1 BASIC9.62□□□□□ -0.87
UBE4BO95155 SMC2-201ENST00000286398 5992 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
UBE4BO95155 CTNNA2-201ENST00000343114 2927 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
UBE4BO95155 AC026887.1-201ENST00000624657 2985 ntBASIC9.62□□□□□ -0.87
UBE4BO95155 ARID1A-209ENST00000615191 3804 ntTSL 5 BASIC9.62□□□□□ -0.87
UBE4BO95155 TBCK-203ENST00000394706 3349 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
UBE4BO95155 PREPL-208ENST00000410081 3080 ntAPPRIS P1 TSL 5 BASIC9.62□□□□□ -0.87
UBE4BO95155 AC025822.2-201ENST00000455199 2287 ntTSL 2 BASIC9.62□□□□□ -0.87
UBE4BO95155 AC019117.2-202ENST00000635900 1476 ntTSL 5 BASIC9.62□□□□□ -0.87
UBE4BO95155 LINC01139-201ENST00000400946 1537 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
UBE4BO95155 ICA1L-202ENST00000392237 5173 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
UBE4BO95155 OR10K1-201ENST00000289451 1073 ntAPPRIS P1 BASIC9.61□□□□□ -0.87
UBE4BO95155 AL137845.1-201ENST00000340681 1110 ntBASIC9.61□□□□□ -0.87
UBE4BO95155 MED28P1-201ENST00000399158 571 ntBASIC9.61□□□□□ -0.87
UBE4BO95155 BCAS2P3-201ENST00000416374 767 ntBASIC9.61□□□□□ -0.87
UBE4BO95155 Z97634.1-203ENST00000435229 471 ntBASIC9.61□□□□□ -0.87
UBE4BO95155 DEFA10P-201ENST00000455014 288 ntBASIC9.61□□□□□ -0.87
UBE4BO95155 AP001318.1-201ENST00000476981 321 ntBASIC9.61□□□□□ -0.87
UBE4BO95155 RACK1-211ENST00000504726 388 ntTSL 5 BASIC9.61□□□□□ -0.87
UBE4BO95155 GLTPP1-201ENST00000528859 622 ntBASIC9.61□□□□□ -0.87
UBE4BO95155 AC022880.2-201ENST00000532664 270 ntBASIC9.61□□□□□ -0.87
UBE4BO95155 AC005871.2-201ENST00000549104 526 ntTSL 4 BASIC9.61□□□□□ -0.87
UBE4BO95155 NPC2-209ENST00000557510 1029 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
UBE4BO95155 AC018554.2-201ENST00000563482 261 ntBASIC9.61□□□□□ -0.87
UBE4BO95155 AL049634.2-203ENST00000564763 588 ntAPPRIS ALT2 TSL 4 BASIC9.61□□□□□ -0.87
UBE4BO95155 Z95115.1-202ENST00000565764 981 ntTSL 2 BASIC9.61□□□□□ -0.87
UBE4BO95155 AC010542.1-201ENST00000568430 555 ntTSL 4 BASIC9.61□□□□□ -0.87
UBE4BO95155 ZEB2P1-202ENST00000572816 902 ntTSL 5 BASIC9.61□□□□□ -0.87
UBE4BO95155 AC024619.3-201ENST00000582196 323 ntTSL 2 BASIC9.61□□□□□ -0.87
UBE4BO95155 AC003098.1-201ENST00000591540 494 ntTSL 3 BASIC9.61□□□□□ -0.87
UBE4BO95155 AC009502.1-202ENST00000606673 602 ntTSL 3 BASIC9.61□□□□□ -0.87
UBE4BO95155 Z98752.3-201ENST00000621802 566 ntAPPRIS P1 TSL 2 BASIC9.61□□□□□ -0.87
UBE4BO95155 FAXDC2-201ENST00000326080 3251 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
UBE4BO95155 SMIM8-201ENST00000229570 2405 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
UBE4BO95155 GPR155-203ENST00000392552 6730 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
UBE4BO95155 RBMS3-201ENST00000273139 1598 ntAPPRIS P3 TSL 1 (best) BASIC9.61□□□□□ -0.87
UBE4BO95155 BBS9-202ENST00000350941 3899 ntTSL 5 BASIC9.61□□□□□ -0.87
UBE4BO95155 PRR27-202ENST00000502294 3007 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
UBE4BO95155 CACNA2D4-223ENST00000588077 3311 ntAPPRIS ALT2 TSL 5 BASIC9.61□□□□□ -0.87
UBE4BO95155 GPNMB-202ENST00000381990 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
UBE4BO95155 TUBA1A-202ENST00000301071 1915 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
UBE4BO95155 ARMC8-215ENST00000471453 2910 ntTSL 2 BASIC9.61□□□□□ -0.87
UBE4BO95155 LINC00410-201ENST00000419272 2018 ntTSL 2 BASIC9.61□□□□□ -0.87
UBE4BO95155 TMEM106A-208ENST00000612339 3266 ntAPPRIS P1 TSL 2 BASIC9.61□□□□□ -0.87
UBE4BO95155 CLEC1A-201ENST00000315330 2685 ntAPPRIS P3 TSL 1 (best) BASIC9.61□□□□□ -0.87
UBE4BO95155 IL15-202ENST00000320650 1447 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
UBE4BO95155 RNF138-201ENST00000257190 2071 ntTSL 2 BASIC9.61□□□□□ -0.87
UBE4BO95155 ZNF3-207ENST00000424697 2718 ntAPPRIS P1 TSL 3 BASIC9.61□□□□□ -0.87
UBE4BO95155 NTRK3-221ENST00000629765 2714 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
UBE4BO95155 AC091013.1-201ENST00000499752 3734 ntTSL 2 BASIC9.61□□□□□ -0.87
UBE4BO95155 CACNB2-204ENST00000377315 3461 ntAPPRIS ALT1 TSL 1 (best) BASIC9.61□□□□□ -0.87
UBE4BO95155 MORF4L2-201ENST00000360458 1824 ntAPPRIS P1 TSL 2 BASIC9.61□□□□□ -0.87
UBE4BO95155 GDNF-AS1-205ENST00000637926 3819 ntTSL 5 BASIC9.61□□□□□ -0.87
UBE4BO95155 LINC01572-201ENST00000561611 2194 ntTSL 3 BASIC9.61□□□□□ -0.87
UBE4BO95155 SCMH1-205ENST00000372595 3231 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
UBE4BO95155 KLHL3-209ENST00000508657 6981 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
UBE4BO95155 DCAF1-203ENST00000504652 5951 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
UBE4BO95155 USP28-205ENST00000537706 1900 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
UBE4BO95155 FRRS1-201ENST00000287474 2678 ntAPPRIS P1 TSL 2 BASIC9.6□□□□□ -0.87
UBE4BO95155 CD28-201ENST00000324106 4812 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
UBE4BO95155 ZNF322-201ENST00000415922 4817 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
UBE4BO95155 FOLH1B-201ENST00000525540 1974 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
UBE4BO95155 ZNF146-202ENST00000456324 3780 ntAPPRIS P1 TSL 2 BASIC9.6□□□□□ -0.87
UBE4BO95155 UBE2D3-202ENST00000338145 896 ntAPPRIS ALT1 TSL 5 BASIC9.6□□□□□ -0.87
UBE4BO95155 NEK10-203ENST00000383770 1257 ntTSL 5 BASIC9.6□□□□□ -0.87
UBE4BO95155 AC084880.1-201ENST00000392530 545 ntBASIC9.6□□□□□ -0.87
UBE4BO95155 CFL1P7-201ENST00000424759 486 ntBASIC9.6□□□□□ -0.87
UBE4BO95155 LINC00892-202ENST00000429841 529 ntTSL 2 BASIC9.6□□□□□ -0.87
UBE4BO95155 RALY-AS1-202ENST00000432859 610 ntTSL 3 BASIC9.6□□□□□ -0.87
UBE4BO95155 WBP1LP7-201ENST00000437905 363 ntBASIC9.6□□□□□ -0.87
UBE4BO95155 MTND6P21-201ENST00000443620 482 ntBASIC9.6□□□□□ -0.87
UBE4BO95155 AL445189.2-201ENST00000447543 259 ntBASIC9.6□□□□□ -0.87
UBE4BO95155 LINC01937-201ENST00000448543 553 ntTSL 4 BASIC9.6□□□□□ -0.87
UBE4BO95155 RPL12P42-201ENST00000481802 499 ntBASIC9.6□□□□□ -0.87
UBE4BO95155 AC008632.1-201ENST00000519400 753 ntTSL 3 BASIC9.6□□□□□ -0.87
UBE4BO95155 IGKV2D-18-201ENST00000519785 375 ntBASIC9.6□□□□□ -0.87
UBE4BO95155 AC023946.1-201ENST00000526867 594 ntTSL 3 BASIC9.6□□□□□ -0.87
UBE4BO95155 OR7E159P-201ENST00000553761 298 ntBASIC9.6□□□□□ -0.87
UBE4BO95155 PRKAR1A-214ENST00000588188 1209 ntTSL 3 BASIC9.6□□□□□ -0.87
UBE4BO95155 AC005176.1-203ENST00000597077 532 ntTSL 3 BASIC9.6□□□□□ -0.87
UBE4BO95155 AC119619.1-201ENST00000619728 112 ntBASIC9.6□□□□□ -0.87
UBE4BO95155 Metazoa_SRP.164-201ENST00000620748 331 ntBASIC9.6□□□□□ -0.87
UBE4BO95155 OR12D2-206ENST00000623183 1069 ntAPPRIS P1 BASIC9.6□□□□□ -0.87
UBE4BO95155 CR589904.1-203ENST00000636515 318 ntBASIC9.6□□□□□ -0.87
UBE4BO95155 FAM238C-205ENST00000640641 391 ntBASIC9.6□□□□□ -0.87
UBE4BO95155 USP17L15-202ENST00000621432 1680 ntAPPRIS P2 TSL 5 BASIC9.6□□□□□ -0.87
UBE4BO95155 PRICKLE2-AS1-201ENST00000482609 6505 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
UBE4BO95155 ZNF333-201ENST00000292530 4672 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
UBE4BO95155 SLC7A6-201ENST00000219343 6251 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
UBE4BO95155 CLASP1-203ENST00000409078 8002 ntAPPRIS P1 TSL 5 BASIC9.6□□□□□ -0.87
UBE4BO95155 ZNF445-202ENST00000425708 10052 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Retrieved 100 of 98,524 protein–RNA pairs in 140.4 ms