Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 RPS6-202ENST00000380381 892 ntTSL 2 BASIC8.14□□□□□ -1.11
SNX18Q96RF0 AL031777.1-201ENST00000405418 499 ntBASIC8.14□□□□□ -1.11
SNX18Q96RF0 RNA5SP29-201ENST00000410988 106 ntBASIC8.14□□□□□ -1.11
SNX18Q96RF0 RPSAP33-201ENST00000432315 865 ntBASIC8.14□□□□□ -1.11
SNX18Q96RF0 AL359921.1-201ENST00000433131 494 ntTSL 3 BASIC8.14□□□□□ -1.11
SNX18Q96RF0 AL009172.1-201ENST00000436365 1098 ntBASIC8.14□□□□□ -1.11
SNX18Q96RF0 LINC02243-201ENST00000441841 961 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
SNX18Q96RF0 AL158825.2-201ENST00000455336 670 ntTSL 5 BASIC8.14□□□□□ -1.11
SNX18Q96RF0 RPL12P37-201ENST00000486874 495 ntBASIC8.14□□□□□ -1.11
SNX18Q96RF0 PGAM1P1-201ENST00000504014 556 ntBASIC8.14□□□□□ -1.11
SNX18Q96RF0 FAM197Y9-203ENST00000505707 345 ntBASIC8.14□□□□□ -1.11
SNX18Q96RF0 AC024451.1-201ENST00000508013 779 ntBASIC8.14□□□□□ -1.11
SNX18Q96RF0 AC010368.1-201ENST00000510160 456 ntBASIC8.14□□□□□ -1.11
SNX18Q96RF0 AC106794.2-201ENST00000513713 632 ntBASIC8.14□□□□□ -1.11
SNX18Q96RF0 AC136604.3-202ENST00000514793 485 ntTSL 5 BASIC8.14□□□□□ -1.11
SNX18Q96RF0 IGHVII-1-1-201ENST00000517907 180 ntBASIC8.14□□□□□ -1.11
SNX18Q96RF0 AL355916.3-201ENST00000556347 779 ntAPPRIS P1 TSL 4 BASIC8.14□□□□□ -1.11
SNX18Q96RF0 AP006545.1-201ENST00000563059 911 ntBASIC8.14□□□□□ -1.11
SNX18Q96RF0 AC079791.1-201ENST00000605356 973 ntBASIC8.14□□□□□ -1.11
SNX18Q96RF0 AC008875.1-201ENST00000607715 811 ntBASIC8.14□□□□□ -1.11
SNX18Q96RF0 FAM197Y4-201ENST00000616275 467 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
SNX18Q96RF0 FAM197Y5-203ENST00000619815 467 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
SNX18Q96RF0 AL109614.1-201ENST00000620327 419 ntBASIC8.14□□□□□ -1.11
SNX18Q96RF0 EAF1-AS1-212ENST00000626521 561 ntTSL 5 BASIC8.14□□□□□ -1.11
SNX18Q96RF0 CTBP1-219ENST00000629223 210 ntTSL 5 BASIC8.14□□□□□ -1.11
SNX18Q96RF0 PAX6-270ENST00000640368 6975 ntAPPRIS P4 TSL 5 BASIC8.14□□□□□ -1.11
SNX18Q96RF0 BTN2A1-203ENST00000429381 3113 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
SNX18Q96RF0 HACL1-208ENST00000456194 1880 ntTSL 2 BASIC8.14□□□□□ -1.11
SNX18Q96RF0 CDC42SE1-201ENST00000357235 3045 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
SNX18Q96RF0 SSPO-201ENST00000378016 15589 ntAPPRIS P1 TSL 5 BASIC8.14□□□□□ -1.11
SNX18Q96RF0 PPP2R3A-205ENST00000490467 1782 ntTSL 2 BASIC8.14□□□□□ -1.11
SNX18Q96RF0 CYB5D1-201ENST00000332439 3509 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
SNX18Q96RF0 PPARG-207ENST00000397015 1722 ntAPPRIS ALT1 TSL 1 (best) BASIC8.14□□□□□ -1.11
SNX18Q96RF0 CD200R1-202ENST00000308611 2299 ntAPPRIS P4 TSL 1 (best) BASIC8.14□□□□□ -1.11
SNX18Q96RF0 ERMAP-201ENST00000328249 3949 ntAPPRIS ALT2 TSL 1 (best) BASIC8.14□□□□□ -1.11
SNX18Q96RF0 NOLC1-209ENST00000605788 3932 ntAPPRIS P3 TSL 1 (best) BASIC8.14□□□□□ -1.11
SNX18Q96RF0 PTCD3-201ENST00000254630 6734 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
SNX18Q96RF0 HSPD1P10-201ENST00000404829 1676 ntBASIC8.14□□□□□ -1.11
SNX18Q96RF0 SERBP1-203ENST00000370994 6676 ntAPPRIS P3 TSL 1 (best) BASIC8.14□□□□□ -1.11
SNX18Q96RF0 GOSR2-220ENST00000638838 3266 ntAPPRIS ALT1 TSL 5 BASIC8.14□□□□□ -1.11
SNX18Q96RF0 RGS4-203ENST00000367909 3200 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
SNX18Q96RF0 PTPRT-211ENST00000618610 3230 ntTSL 5 BASIC8.14□□□□□ -1.11
SNX18Q96RF0 RAB3IP-218ENST00000553099 2674 ntTSL 2 BASIC8.14□□□□□ -1.11
SNX18Q96RF0 MAVS-201ENST00000416600 11596 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
SNX18Q96RF0 P2RY10-204ENST00000544091 1597 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
SNX18Q96RF0 JAZF1-201ENST00000283928 3125 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
SNX18Q96RF0 FRG2B-202ENST00000443774 2094 ntAPPRIS ALT2 TSL 1 (best) BASIC8.14□□□□□ -1.11
SNX18Q96RF0 ALDH7A1P1-201ENST00000510973 1533 ntBASIC8.13□□□□□ -1.11
SNX18Q96RF0 TRIM53AP-201ENST00000532014 1544 ntBASIC8.13□□□□□ -1.11
SNX18Q96RF0 CTC1-201ENST00000315684 7021 ntAPPRIS P2 TSL 1 (best) BASIC8.13□□□□□ -1.11
SNX18Q96RF0 OR2A20P-201ENST00000479887 2913 ntBASIC8.13□□□□□ -1.11
SNX18Q96RF0 DHRS9-201ENST00000357546 1917 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
SNX18Q96RF0 PTPN20-201ENST00000374218 2872 ntAPPRIS ALT2 TSL 5 BASIC8.13□□□□□ -1.11
SNX18Q96RF0 MOSPD2-204ENST00000482354 1870 ntTSL 5 BASIC8.13□□□□□ -1.11
SNX18Q96RF0 ESRP1-202ENST00000423620 3746 ntAPPRIS ALT1 TSL 1 (best) BASIC8.13□□□□□ -1.11
SNX18Q96RF0 SPX-201ENST00000256969 2269 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
SNX18Q96RF0 MAMLD1-204ENST00000426613 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC8.13□□□□□ -1.11
SNX18Q96RF0 ESRG-201ENST00000583516 3140 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
SNX18Q96RF0 CD300LD-201ENST00000375352 1303 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
SNX18Q96RF0 NUMA1-232ENST00000613205 3940 ntAPPRIS ALT2 TSL 5 BASIC8.13□□□□□ -1.11
SNX18Q96RF0 LIMCH1-209ENST00000509277 3474 ntTSL 2 BASIC8.13□□□□□ -1.11
SNX18Q96RF0 ABLIM1-206ENST00000392952 6841 ntTSL 5 BASIC8.13□□□□□ -1.11
SNX18Q96RF0 ZNF626-201ENST00000291750 1123 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
SNX18Q96RF0 HIST1H2AA-201ENST00000297012 396 ntAPPRIS P1 BASIC8.13□□□□□ -1.11
SNX18Q96RF0 OR2AG2-201ENST00000338569 1069 ntAPPRIS P1 BASIC8.13□□□□□ -1.11
SNX18Q96RF0 RN7SKP93-201ENST00000363838 309 ntBASIC8.13□□□□□ -1.11
SNX18Q96RF0 RLN2-201ENST00000381627 1177 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
SNX18Q96RF0 MIR503-201ENST00000385270 71 ntBASIC8.13□□□□□ -1.11
SNX18Q96RF0 HNRNPA1P64-201ENST00000411674 922 ntBASIC8.13□□□□□ -1.11
SNX18Q96RF0 AL135905.1-201ENST00000416120 801 ntBASIC8.13□□□□□ -1.11
SNX18Q96RF0 TRPC6P-201ENST00000421233 880 ntBASIC8.13□□□□□ -1.11
SNX18Q96RF0 AP001062.2-201ENST00000426029 127 ntTSL 3 BASIC8.13□□□□□ -1.11
SNX18Q96RF0 AL121578.1-201ENST00000428051 892 ntBASIC8.13□□□□□ -1.11
SNX18Q96RF0 AL133387.1-201ENST00000442188 382 ntTSL 3 BASIC8.13□□□□□ -1.11
SNX18Q96RF0 FTLP18-201ENST00000453860 523 ntBASIC8.13□□□□□ -1.11
SNX18Q96RF0 AC092965.1-201ENST00000469748 490 ntBASIC8.13□□□□□ -1.11
SNX18Q96RF0 FAM122B-207ENST00000493333 1078 ntAPPRIS ALT2 TSL 5 BASIC8.13□□□□□ -1.11
SNX18Q96RF0 OR10J8P-201ENST00000504659 929 ntBASIC8.13□□□□□ -1.11
SNX18Q96RF0 AC024451.3-201ENST00000517810 463 ntBASIC8.13□□□□□ -1.11
SNX18Q96RF0 AC084128.1-201ENST00000523112 501 ntTSL 3 BASIC8.13□□□□□ -1.11
SNX18Q96RF0 AC103681.1-201ENST00000531663 423 ntTSL 3 BASIC8.13□□□□□ -1.11
SNX18Q96RF0 RTN4IP1-204ENST00000539449 814 ntTSL 2 BASIC8.13□□□□□ -1.11
SNX18Q96RF0 LINC02454-202ENST00000541391 612 ntTSL 3 BASIC8.13□□□□□ -1.11
SNX18Q96RF0 AC090607.3-201ENST00000559954 388 ntTSL 2 BASIC8.13□□□□□ -1.11
SNX18Q96RF0 AF001548.2-201ENST00000574212 836 ntTSL 2 BASIC8.13□□□□□ -1.11
SNX18Q96RF0 AC103949.1-201ENST00000582064 457 ntTSL 3 BASIC8.13□□□□□ -1.11
SNX18Q96RF0 AC024619.3-201ENST00000582196 323 ntTSL 2 BASIC8.13□□□□□ -1.11
SNX18Q96RF0 ZRANB2-AS2-206ENST00000583678 551 ntTSL 4 BASIC8.13□□□□□ -1.11
SNX18Q96RF0 AC005329.2-202ENST00000589673 392 ntTSL 3 BASIC8.13□□□□□ -1.11
SNX18Q96RF0 AC008569.2-201ENST00000589702 889 ntTSL 5 BASIC8.13□□□□□ -1.11
SNX18Q96RF0 RPL12P41-201ENST00000599500 498 ntBASIC8.13□□□□□ -1.11
SNX18Q96RF0 AC097376.2-203ENST00000608663 431 ntTSL 3 BASIC8.13□□□□□ -1.11
SNX18Q96RF0 MIR6831-201ENST00000617240 81 ntBASIC8.13□□□□□ -1.11
SNX18Q96RF0 AC010087.1-201ENST00000618630 438 ntBASIC8.13□□□□□ -1.11
SNX18Q96RF0 MIR8078-201ENST00000619811 84 ntBASIC8.13□□□□□ -1.11
SNX18Q96RF0 C22orf24-203ENST00000623735 1247 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
SNX18Q96RF0 ANAPC1-210ENST00000628342 450 ntTSL 5 BASIC8.13□□□□□ -1.11
SNX18Q96RF0 CR589904.1-203ENST00000636515 318 ntBASIC8.13□□□□□ -1.11
SNX18Q96RF0 ABBA01040607.1-201ENST00000640749 321 ntBASIC8.13□□□□□ -1.11
SNX18Q96RF0 TRIM49D1-201ENST00000420869 1651 ntAPPRIS P2 TSL 5 BASIC8.13□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 58.4 ms