Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 FIGNL1-214ENST00000617389 3259 ntAPPRIS P1 TSL 4 BASIC9.37□□□□□ -0.91
MTHFRP42898 AC091962.1-201ENST00000561496 1765 ntBASIC9.37□□□□□ -0.91
MTHFRP42898 MITF-202ENST00000314589 1993 ntTSL 2 BASIC9.37□□□□□ -0.91
MTHFRP42898 RNF2-202ENST00000367510 3606 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
MTHFRP42898 EZH1-205ENST00000585893 2394 ntTSL 2 BASIC9.37□□□□□ -0.91
MTHFRP42898 EZH1-217ENST00000590078 2392 ntTSL 2 BASIC9.37□□□□□ -0.91
MTHFRP42898 TAF1-201ENST00000276072 5692 ntAPPRIS P3 TSL 5 BASIC9.37□□□□□ -0.91
MTHFRP42898 SNX27-201ENST00000368838 1308 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
MTHFRP42898 POLR3A-201ENST00000372371 6640 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
MTHFRP42898 GRB10-203ENST00000398810 4785 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
MTHFRP42898 TP63-212ENST00000456148 1749 ntAPPRIS ALT1 TSL 5 BASIC9.37□□□□□ -0.91
MTHFRP42898 GNGT1-205ENST00000455502 1943 ntTSL 2 BASIC9.37□□□□□ -0.91
MTHFRP42898 ANKRD55-201ENST00000341048 2502 ntAPPRIS P1 TSL 2 BASIC9.37□□□□□ -0.91
MTHFRP42898 TTLL7-IT1-201ENST00000455929 2921 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
MTHFRP42898 TCAF1-201ENST00000355951 3343 ntAPPRIS ALT1 TSL 1 (best) BASIC9.37□□□□□ -0.91
MTHFRP42898 SCMH1-206ENST00000372596 3323 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
MTHFRP42898 LINC00402-201ENST00000419499 3340 ntTSL 2 BASIC9.37□□□□□ -0.91
MTHFRP42898 SPTAN1-203ENST00000372739 7868 ntAPPRIS ALT1 TSL 1 (best) BASIC9.37□□□□□ -0.91
MTHFRP42898 LINC00870-202ENST00000473713 2693 ntTSL 2 BASIC9.37□□□□□ -0.91
MTHFRP42898 COPS5-201ENST00000357849 1480 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
MTHFRP42898 CAMK2D-208ENST00000508738 1470 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
MTHFRP42898 ALDH1A2-217ENST00000559517 1468 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
MTHFRP42898 SMR3A-201ENST00000226460 665 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
MTHFRP42898 SEZ6L2-201ENST00000308713 3801 ntAPPRIS P4 TSL 1 (best) BASIC9.37□□□□□ -0.91
MTHFRP42898 HCG18-234ENST00000413358 916 ntTSL 3 BASIC9.37□□□□□ -0.91
MTHFRP42898 CFL1P7-201ENST00000424759 486 ntBASIC9.37□□□□□ -0.91
MTHFRP42898 GYG1P2-201ENST00000426437 1006 ntBASIC9.37□□□□□ -0.91
MTHFRP42898 RPS23P8-201ENST00000429775 330 ntBASIC9.37□□□□□ -0.91
MTHFRP42898 LLPHP2-201ENST00000436405 396 ntBASIC9.37□□□□□ -0.91
MTHFRP42898 AL353615.1-201ENST00000450850 390 ntTSL 3 BASIC9.37□□□□□ -0.91
MTHFRP42898 AL137024.1-201ENST00000451100 728 ntTSL 3 BASIC9.37□□□□□ -0.91
MTHFRP42898 AL365436.1-201ENST00000452587 495 ntBASIC9.37□□□□□ -0.91
MTHFRP42898 RN7SL749P-201ENST00000460421 290 ntBASIC9.37□□□□□ -0.91
MTHFRP42898 AC092965.1-201ENST00000469748 490 ntBASIC9.37□□□□□ -0.91
MTHFRP42898 RN7SL368P-201ENST00000473384 277 ntBASIC9.37□□□□□ -0.91
MTHFRP42898 AC027343.3-201ENST00000504494 564 ntTSL 4 BASIC9.37□□□□□ -0.91
MTHFRP42898 AC108865.1-201ENST00000507644 496 ntTSL 3 BASIC9.37□□□□□ -0.91
MTHFRP42898 GAPDHP44-201ENST00000513513 1007 ntBASIC9.37□□□□□ -0.91
MTHFRP42898 RNA5SP422-201ENST00000516778 111 ntBASIC9.37□□□□□ -0.91
MTHFRP42898 AC099687.1-201ENST00000531798 510 ntTSL 3 BASIC9.37□□□□□ -0.91
MTHFRP42898 LDHA-220ENST00000542179 1288 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
MTHFRP42898 PHBP19-201ENST00000547512 754 ntBASIC9.37□□□□□ -0.91
MTHFRP42898 AC018448.2-201ENST00000548295 305 ntBASIC9.37□□□□□ -0.91
MTHFRP42898 AC009154.1-201ENST00000565822 508 ntTSL 3 BASIC9.37□□□□□ -0.91
MTHFRP42898 AC126335.1-201ENST00000568414 510 ntTSL 2 BASIC9.37□□□□□ -0.91
MTHFRP42898 AC080037.1-201ENST00000584975 889 ntTSL 3 BASIC9.37□□□□□ -0.91
MTHFRP42898 ZSCAN30-210ENST00000601405 510 ntTSL 5 BASIC9.37□□□□□ -0.91
MTHFRP42898 RN7SL760P-201ENST00000607344 270 ntBASIC9.37□□□□□ -0.91
MTHFRP42898 AC110741.3-201ENST00000611983 659 ntBASIC9.37□□□□□ -0.91
MTHFRP42898 LINC01176-202ENST00000628121 716 ntTSL 3 BASIC9.37□□□□□ -0.91
MTHFRP42898 CORIN-208ENST00000508498 3200 ntAPPRIS ALT2 TSL 2 BASIC9.37□□□□□ -0.91
MTHFRP42898 AC008938.1-201ENST00000566929 6510 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
MTHFRP42898 MYO1H-201ENST00000310903 4364 ntTSL 5 BASIC9.37□□□□□ -0.91
MTHFRP42898 TRERF1-201ENST00000340840 4174 ntTSL 5 BASIC9.37□□□□□ -0.91
MTHFRP42898 ZNF608-203ENST00000504926 4726 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
MTHFRP42898 EPB41L5-204ENST00000443902 3167 ntTSL 2 BASIC9.37□□□□□ -0.91
MTHFRP42898 IL17RD-202ENST00000320057 4474 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
MTHFRP42898 ZNF250-201ENST00000292579 6364 ntAPPRIS P3 TSL 1 (best) BASIC9.37□□□□□ -0.91
MTHFRP42898 BMS1P1-202ENST00000580094 4294 ntTSL 5 BASIC9.37□□□□□ -0.91
MTHFRP42898 SEC16B-204ENST00000464631 2948 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
MTHFRP42898 MORF4L2-203ENST00000422154 1983 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
MTHFRP42898 DDR2-201ENST00000367921 3096 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
MTHFRP42898 ASTE1-201ENST00000264992 2664 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
MTHFRP42898 CNOT4-212ENST00000541284 3563 ntAPPRIS ALT1 TSL 5 BASIC9.37□□□□□ -0.91
MTHFRP42898 PABPC3-201ENST00000281589 3387 ntAPPRIS P1 BASIC9.37□□□□□ -0.91
MTHFRP42898 DCAF8L2-202ENST00000451261 2295 ntAPPRIS P1 TSL 4 BASIC9.36□□□□□ -0.91
MTHFRP42898 SPATA46-201ENST00000367935 1711 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
MTHFRP42898 NDUFS1-202ENST00000423725 2631 ntTSL 2 BASIC9.36□□□□□ -0.91
MTHFRP42898 ATF7-201ENST00000420353 6680 ntAPPRIS P2 TSL 1 (best) BASIC9.36□□□□□ -0.91
MTHFRP42898 IL5RA-202ENST00000311981 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
MTHFRP42898 EIF4G2-201ENST00000339995 3978 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
MTHFRP42898 CEP70-210ENST00000481834 2037 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
MTHFRP42898 COL28A1-201ENST00000399429 4277 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
MTHFRP42898 AP1G1-202ENST00000393512 3593 ntAPPRIS ALT1 TSL 5 BASIC9.36□□□□□ -0.91
MTHFRP42898 LDB2-201ENST00000304523 2548 ntAPPRIS P3 TSL 1 (best) BASIC9.36□□□□□ -0.91
MTHFRP42898 ZNF10-203ENST00000426665 2169 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
MTHFRP42898 AC013391.3-201ENST00000567484 1456 ntBASIC9.36□□□□□ -0.91
MTHFRP42898 TRPV1-203ENST00000399759 4092 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
MTHFRP42898 MERTK-202ENST00000409780 3189 ntAPPRIS ALT2 TSL 5 BASIC9.36□□□□□ -0.91
MTHFRP42898 SSR2-201ENST00000295702 1116 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
MTHFRP42898 AC008937.2-201ENST00000415589 619 ntTSL 3 BASIC9.36□□□□□ -0.91
MTHFRP42898 AC069213.1-202ENST00000417011 810 ntTSL 2 BASIC9.36□□□□□ -0.91
MTHFRP42898 AL772284.1-201ENST00000443421 905 ntBASIC9.36□□□□□ -0.91
MTHFRP42898 IGKV1-16-201ENST00000479981 378 ntAPPRIS P1 BASIC9.36□□□□□ -0.91
MTHFRP42898 AC091144.2-201ENST00000521717 433 ntBASIC9.36□□□□□ -0.91
MTHFRP42898 TMEM185AP1-201ENST00000524311 546 ntBASIC9.36□□□□□ -0.91
MTHFRP42898 AC243972.2-201ENST00000541653 991 ntBASIC9.36□□□□□ -0.91
MTHFRP42898 AC005833.4-201ENST00000542988 449 ntTSL 3 BASIC9.36□□□□□ -0.91
MTHFRP42898 EIF4EBP1P1-201ENST00000557776 341 ntBASIC9.36□□□□□ -0.91
MTHFRP42898 AC093330.1-204ENST00000582763 396 ntTSL 5 BASIC9.36□□□□□ -0.91
MTHFRP42898 AC012301.1-201ENST00000586391 581 ntTSL 2 BASIC9.36□□□□□ -0.91
MTHFRP42898 ZNF615-206ENST00000597747 704 ntTSL 5 BASIC9.36□□□□□ -0.91
MTHFRP42898 AC015574.1-201ENST00000615194 489 ntTSL 5 BASIC9.36□□□□□ -0.91
MTHFRP42898 MIR6829-201ENST00000620375 67 ntBASIC9.36□□□□□ -0.91
MTHFRP42898 AL158175.1-201ENST00000634327 1127 ntTSL 5 BASIC9.36□□□□□ -0.91
MTHFRP42898 CCDC196-207ENST00000636229 1107 ntAPPRIS P1 TSL 5 BASIC9.36□□□□□ -0.91
MTHFRP42898 NAA25-201ENST00000261745 6010 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
MTHFRP42898 FRAS1-201ENST00000325942 7142 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
MTHFRP42898 CAP2-203ENST00000465994 1404 ntTSL 2 BASIC9.36□□□□□ -0.91
MTHFRP42898 ENTPD1-203ENST00000371207 1903 ntTSL 2 BASIC9.36□□□□□ -0.91
Retrieved 100 of 98,524 protein–RNA pairs in 353.2 ms