Protein–RNA interactions for Protein: O95155

UBE4B, Ubiquitin conjugation factor E4 B, humanhuman

Predictions only

Length 1,302 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4BO95155 DROSHA-220ENST00000513349 4681 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
UBE4BO95155 TRIM49D2-201ENST00000526396 1411 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
UBE4BO95155 IGSF1-206ENST00000370910 4406 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
UBE4BO95155 AL590491.1-201ENST00000611916 1988 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
UBE4BO95155 AC026124.1-201ENST00000545709 3457 ntTSL 5 BASIC9.66□□□□□ -0.86
UBE4BO95155 HERC3-201ENST00000264345 4764 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
UBE4BO95155 ZNF215-202ENST00000414517 3257 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
UBE4BO95155 AC000036.1-201ENST00000449652 2030 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
UBE4BO95155 AL845331.3-201ENST00000562821 2028 ntTSL 2 BASIC9.66□□□□□ -0.86
UBE4BO95155 PCBP2-206ENST00000455667 2741 ntAPPRIS ALT1 TSL 1 (best) BASIC9.66□□□□□ -0.86
UBE4BO95155 PTPRT-207ENST00000373201 12660 ntAPPRIS ALT2 TSL 5 BASIC9.66□□□□□ -0.86
UBE4BO95155 GEMIN6-201ENST00000281950 3728 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
UBE4BO95155 ZBTB14-207ENST00000614697 3341 ntAPPRIS P1 TSL 2 BASIC9.66□□□□□ -0.86
UBE4BO95155 AC009102.1-201ENST00000564074 1777 ntTSL 2 BASIC9.66□□□□□ -0.86
UBE4BO95155 HIPK2-201ENST00000342645 2937 ntTSL 5 BASIC9.66□□□□□ -0.86
UBE4BO95155 IL16-201ENST00000302987 3999 ntAPPRIS P3 TSL 1 (best) BASIC9.65□□□□□ -0.86
UBE4BO95155 TCF4-224ENST00000564403 2696 ntAPPRIS ALT1 TSL 5 BASIC9.65□□□□□ -0.86
UBE4BO95155 ARID5B-202ENST00000309334 3141 ntTSL 5 BASIC9.65□□□□□ -0.86
UBE4BO95155 NUP93-210ENST00000564887 2875 ntTSL 2 BASIC9.65□□□□□ -0.86
UBE4BO95155 FLJ31356-202ENST00000445878 3001 ntTSL 4 BASIC9.65□□□□□ -0.86
UBE4BO95155 TBC1D8B-206ENST00000481617 4098 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
UBE4BO95155 SYNE3-205ENST00000557275 13488 ntAPPRIS ALT1 TSL 2 BASIC9.65□□□□□ -0.86
UBE4BO95155 CKAP2-201ENST00000258607 3375 ntAPPRIS P3 TSL 1 (best) BASIC9.65□□□□□ -0.86
UBE4BO95155 POLD3-201ENST00000263681 3821 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
UBE4BO95155 CD1E-201ENST00000368154 435 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
UBE4BO95155 AC121338.1-201ENST00000380601 1287 ntTSL 2 BASIC9.65□□□□□ -0.86
UBE4BO95155 CCR6-203ENST00000400926 3216 ntAPPRIS P1 TSL 2 BASIC9.65□□□□□ -0.86
UBE4BO95155 U3.33-201ENST00000408117 204 ntBASIC9.65□□□□□ -0.86
UBE4BO95155 LINC02539-201ENST00000411615 737 ntTSL 2 BASIC9.65□□□□□ -0.86
UBE4BO95155 AC012462.3-201ENST00000412951 131 ntTSL 3 BASIC9.65□□□□□ -0.86
UBE4BO95155 MAGEB6P1-201ENST00000416929 1224 ntAPPRIS P1 BASIC9.65□□□□□ -0.86
UBE4BO95155 NBPF19-202ENST00000426482 2344 ntTSL 5 BASIC9.65□□□□□ -0.86
UBE4BO95155 LINC00379-202ENST00000438789 464 ntTSL 3 BASIC9.65□□□□□ -0.86
UBE4BO95155 RPL34P1-201ENST00000450455 354 ntBASIC9.65□□□□□ -0.86
UBE4BO95155 OR11Q1P-201ENST00000451582 877 ntBASIC9.65□□□□□ -0.86
UBE4BO95155 SNX18P4-201ENST00000456554 838 ntBASIC9.65□□□□□ -0.86
UBE4BO95155 AC025062.1-201ENST00000465163 644 ntBASIC9.65□□□□□ -0.86
UBE4BO95155 AC006534.1-201ENST00000469329 541 ntBASIC9.65□□□□□ -0.86
UBE4BO95155 CASC9-201ENST00000504531 1164 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
UBE4BO95155 SDR16C6P-202ENST00000524136 955 ntBASIC9.65□□□□□ -0.86
UBE4BO95155 AP003532.1-201ENST00000529936 310 ntBASIC9.65□□□□□ -0.86
UBE4BO95155 NBPF5P-202ENST00000545941 1032 ntBASIC9.65□□□□□ -0.86
UBE4BO95155 AC018448.2-201ENST00000548295 305 ntBASIC9.65□□□□□ -0.86
UBE4BO95155 STXBP6-206ENST00000548369 682 ntTSL 2 BASIC9.65□□□□□ -0.86
UBE4BO95155 MTCO1P2-201ENST00000554243 703 ntBASIC9.65□□□□□ -0.86
UBE4BO95155 RN7SL138P-201ENST00000577405 287 ntBASIC9.65□□□□□ -0.86
UBE4BO95155 FRG1HP-203ENST00000615326 593 ntTSL 3 BASIC9.65□□□□□ -0.86
UBE4BO95155 AC215522.1-201ENST00000615488 446 ntBASIC9.65□□□□□ -0.86
UBE4BO95155 Metazoa_SRP.62-201ENST00000619972 268 ntBASIC9.65□□□□□ -0.86
UBE4BO95155 AC010332.1-201ENST00000620439 97 ntBASIC9.65□□□□□ -0.86
UBE4BO95155 AL356481.2-201ENST00000629902 528 ntTSL 3 BASIC9.65□□□□□ -0.86
UBE4BO95155 ZNF185-202ENST00000318529 3878 ntAPPRIS ALT2 TSL 2 BASIC9.65□□□□□ -0.86
UBE4BO95155 BCOR-203ENST00000378455 6338 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
UBE4BO95155 SCIMP-203ENST00000574081 2383 ntAPPRIS P3 TSL 1 (best) BASIC9.65□□□□□ -0.86
UBE4BO95155 RFPL4B-201ENST00000441065 1900 ntAPPRIS P1 TSL 2 BASIC9.65□□□□□ -0.86
UBE4BO95155 XIAP-201ENST00000355640 8584 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.86
UBE4BO95155 INHBA-AS1-201ENST00000415848 3005 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
UBE4BO95155 MRPL1-201ENST00000315567 1490 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
UBE4BO95155 FAAH2-201ENST00000374900 1983 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
UBE4BO95155 HPS4-203ENST00000402105 3562 ntTSL 1 (best) BASIC9.65□□□□□ -0.87
UBE4BO95155 NRG3-204ENST00000404576 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.87
UBE4BO95155 ASNSP1-202ENST00000641079 1352 ntBASIC9.65□□□□□ -0.87
UBE4BO95155 AP005060.1-201ENST00000623868 3174 ntBASIC9.65□□□□□ -0.87
UBE4BO95155 ACVR2A-207ENST00000535787 5166 ntTSL 2 BASIC9.64□□□□□ -0.87
UBE4BO95155 GIN1-201ENST00000399004 3229 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
UBE4BO95155 RPAP1-202ENST00000561603 3906 ntTSL 5 BASIC9.64□□□□□ -0.87
UBE4BO95155 AP001107.1-201ENST00000501708 2792 ntTSL 2 BASIC9.64□□□□□ -0.87
UBE4BO95155 RP1-206ENST00000636932 3649 ntTSL 5 BASIC9.64□□□□□ -0.87
UBE4BO95155 SBNO1-203ENST00000602398 4313 ntAPPRIS ALT1 TSL 5 BASIC9.64□□□□□ -0.87
UBE4BO95155 NPC2-201ENST00000238633 796 ntAPPRIS ALT1 TSL 3 BASIC9.64□□□□□ -0.87
UBE4BO95155 AC211476.4-201ENST00000275546 699 ntBASIC9.64□□□□□ -0.87
UBE4BO95155 C14orf2-201ENST00000286953 643 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
UBE4BO95155 VTRNA1-2-201ENST00000365241 89 ntBASIC9.64□□□□□ -0.87
UBE4BO95155 COX7A2-202ENST00000370089 773 ntAPPRIS P2 TSL 1 (best) BASIC9.64□□□□□ -0.87
UBE4BO95155 MAS1L-201ENST00000377127 1260 ntAPPRIS P1 BASIC9.64□□□□□ -0.87
UBE4BO95155 CLLU1OS-201ENST00000378487 686 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
UBE4BO95155 PMS2P5-201ENST00000398065 516 ntBASIC9.64□□□□□ -0.87
UBE4BO95155 AP002761.1-201ENST00000400985 262 ntTSL 3 BASIC9.64□□□□□ -0.87
UBE4BO95155 AL590617.1-201ENST00000405630 748 ntBASIC9.64□□□□□ -0.87
UBE4BO95155 EPPIN-203ENST00000409554 998 ntTSL 5 BASIC9.64□□□□□ -0.87
UBE4BO95155 MRPL48-204ENST00000411840 1197 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
UBE4BO95155 LINC01687-202ENST00000419467 465 ntTSL 3 BASIC9.64□□□□□ -0.87
UBE4BO95155 CARM1P1-201ENST00000426329 1185 ntBASIC9.64□□□□□ -0.87
UBE4BO95155 AP002381.1-201ENST00000439829 615 ntBASIC9.64□□□□□ -0.87
UBE4BO95155 AL773572.1-202ENST00000440221 1004 ntTSL 3 BASIC9.64□□□□□ -0.87
UBE4BO95155 AC023137.1-201ENST00000448241 308 ntTSL 4 BASIC9.64□□□□□ -0.87
UBE4BO95155 AC105393.1-202ENST00000449621 598 ntTSL 3 BASIC9.64□□□□□ -0.87
UBE4BO95155 AL137024.1-201ENST00000451100 728 ntTSL 3 BASIC9.64□□□□□ -0.87
UBE4BO95155 AL592043.2-201ENST00000454146 743 ntBASIC9.64□□□□□ -0.87
UBE4BO95155 AC099681.1-201ENST00000454777 552 ntTSL 4 BASIC9.64□□□□□ -0.87
UBE4BO95155 RN7SL659P-201ENST00000483093 299 ntBASIC9.64□□□□□ -0.87
UBE4BO95155 TDGF1P3-201ENST00000493351 567 ntBASIC9.64□□□□□ -0.87
UBE4BO95155 RPL23AP96-201ENST00000514593 591 ntBASIC9.64□□□□□ -0.87
UBE4BO95155 NMNAT3-214ENST00000514703 584 ntTSL 5 BASIC9.64□□□□□ -0.87
UBE4BO95155 IGKV3-25-201ENST00000523155 253 ntBASIC9.64□□□□□ -0.87
UBE4BO95155 AC003002.1-201ENST00000543226 732 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
UBE4BO95155 BANF2-205ENST00000545418 360 ntTSL 3 BASIC9.64□□□□□ -0.87
UBE4BO95155 ANKS1B-205ENST00000546568 1281 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
UBE4BO95155 PDE6G-202ENST00000571004 458 ntAPPRIS P1 TSL 3 BASIC9.64□□□□□ -0.87
UBE4BO95155 ZNF85-208ENST00000597314 563 ntTSL 4 BASIC9.64□□□□□ -0.87
Retrieved 100 of 98,524 protein–RNA pairs in 109.7 ms