Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 AC138512.1-201ENST00000563190 434 ntTSL 3 BASIC8.2□□□□□ -1.1
P04436 HMGN2P46-208ENST00000598619 490 ntBASIC8.2□□□□□ -1.1
P04436 ZNF780B-206ENST00000598845 401 ntTSL 3 BASIC8.2□□□□□ -1.1
P04436 uc_338.3-201ENST00000613268 181 ntBASIC8.2□□□□□ -1.1
P04436 Metazoa_SRP.30-201ENST00000621054 280 ntBASIC8.2□□□□□ -1.1
P04436 IL4-204ENST00000622422 717 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
P04436 AC135068.6-201ENST00000625294 622 ntBASIC8.2□□□□□ -1.1
P04436 SCUBE3-201ENST00000274938 7356 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
P04436 TMEM236-201ENST00000377495 5464 ntAPPRIS P1 TSL 2 BASIC8.2□□□□□ -1.1
P04436 RGS17-201ENST00000206262 1636 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
P04436 APOL1-205ENST00000422706 2901 ntAPPRIS ALT2 TSL 3 BASIC8.2□□□□□ -1.1
P04436 LINC01007-201ENST00000434537 2291 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
P04436 OXNAD1-201ENST00000285083 3929 ntAPPRIS P2 TSL 1 (best) BASIC8.2□□□□□ -1.1
P04436 ITGA6-206ENST00000442250 3393 ntTSL 5 BASIC8.2□□□□□ -1.1
P04436 GON4L-217ENST00000615926 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC8.2□□□□□ -1.1
P04436 SPATA46-201ENST00000367935 1711 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
P04436 KIF1B-211ENST00000620295 8624 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
P04436 TBCCD1-201ENST00000338733 2441 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
P04436 KCNE1-206ENST00000432085 3184 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
P04436 TNIP3-203ENST00000507879 1778 ntAPPRIS ALT2 TSL 2 BASIC8.2□□□□□ -1.1
P04436 ABCE1-201ENST00000296577 3921 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
P04436 ESCO2-201ENST00000305188 3922 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
P04436 UBE3B-207ENST00000537063 3600 ntTSL 3 BASIC8.2□□□□□ -1.1
P04436 OR1S1-202ENST00000641544 1474 ntAPPRIS P1 BASIC8.19□□□□□ -1.1
P04436 TGIF2-208ENST00000611732 3344 ntAPPRIS P1 TSL 2 BASIC8.19□□□□□ -1.1
P04436 SMC6-207ENST00000448223 5233 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
P04436 ATF3-206ENST00000366987 1917 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
P04436 TRIM52-205ENST00000611618 3466 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
P04436 CCR1-201ENST00000296140 2731 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
P04436 NFASC-204ENST00000401399 10205 ntAPPRIS ALT1 TSL 1 (best) BASIC8.19□□□□□ -1.1
P04436 LRRC37BP1-203ENST00000417404 4742 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
P04436 GRIK2-207ENST00000421544 4789 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
P04436 ZNF620-201ENST00000314529 3291 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
P04436 AC107398.3-201ENST00000562284 7000 ntBASIC8.19□□□□□ -1.1
P04436 PEG10-202ENST00000482108 6618 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
P04436 Z97985.1-201ENST00000332270 946 ntBASIC8.19□□□□□ -1.1
P04436 TAC1-202ENST00000346867 1011 ntAPPRIS ALT1 TSL 3 BASIC8.19□□□□□ -1.1
P04436 OR6B1-201ENST00000408922 1055 ntAPPRIS P1 BASIC8.19□□□□□ -1.1
P04436 AGBL5-IT1-201ENST00000411862 339 ntTSL 3 BASIC8.19□□□□□ -1.1
P04436 AL135905.1-201ENST00000416120 801 ntBASIC8.19□□□□□ -1.1
P04436 AC152007.1-201ENST00000428521 224 ntBASIC8.19□□□□□ -1.1
P04436 ASS1P11-201ENST00000441309 1216 ntBASIC8.19□□□□□ -1.1
P04436 AL445189.2-201ENST00000447543 259 ntBASIC8.19□□□□□ -1.1
P04436 ARAFP3-201ENST00000454154 490 ntBASIC8.19□□□□□ -1.1
P04436 ST13P18-201ENST00000456632 1027 ntBASIC8.19□□□□□ -1.1
P04436 AL357874.2-201ENST00000457044 679 ntTSL 3 BASIC8.19□□□□□ -1.1
P04436 GAPDHP47-201ENST00000489113 999 ntBASIC8.19□□□□□ -1.1
P04436 MRPS28-207ENST00000521434 585 ntTSL 5 BASIC8.19□□□□□ -1.1
P04436 AC008514.1-201ENST00000521965 602 ntTSL 3 BASIC8.19□□□□□ -1.1
P04436 BANF2-205ENST00000545418 360 ntTSL 3 BASIC8.19□□□□□ -1.1
P04436 AC093249.3-201ENST00000562444 424 ntBASIC8.19□□□□□ -1.1
P04436 snoZ6.4-201ENST00000581669 55 ntBASIC8.19□□□□□ -1.1
P04436 AC080037.1-201ENST00000584975 889 ntTSL 3 BASIC8.19□□□□□ -1.1
P04436 AC034198.2-201ENST00000606447 510 ntBASIC8.19□□□□□ -1.1
P04436 AC083862.2-201ENST00000608819 1145 ntBASIC8.19□□□□□ -1.1
P04436 uc_338.30-201ENST00000612038 168 ntBASIC8.19□□□□□ -1.1
P04436 HOXA11-AS1_2.1-201ENST00000615604 187 ntBASIC8.19□□□□□ -1.1
P04436 HIST1H2BM-201ENST00000621112 381 ntAPPRIS P1 BASIC8.19□□□□□ -1.1
P04436 AC011389.3-201ENST00000623273 999 ntBASIC8.19□□□□□ -1.1
P04436 EXOC1L-202ENST00000636125 863 ntAPPRIS P1 TSL 3 BASIC8.19□□□□□ -1.1
P04436 AL356234.2-201ENST00000637996 1160 ntTSL 5 BASIC8.19□□□□□ -1.1
P04436 FAM238C-205ENST00000640641 391 ntBASIC8.19□□□□□ -1.1
P04436 NUDT5-207ENST00000491614 3433 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
P04436 SMAP2-206ENST00000614549 2570 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
P04436 BACE1-202ENST00000392937 5155 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
P04436 TP63-212ENST00000456148 1749 ntAPPRIS ALT1 TSL 5 BASIC8.19□□□□□ -1.1
P04436 TMPRSS7-203ENST00000452346 2616 ntTSL 5 BASIC8.19□□□□□ -1.1
P04436 UBR4-201ENST00000375218 4031 ntTSL 2 BASIC8.19□□□□□ -1.1
P04436 TMTC4-202ENST00000342624 3602 ntTSL 2 BASIC8.19□□□□□ -1.1
P04436 GJB2-202ENST00000382848 2250 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
P04436 NDUFV3-201ENST00000340344 4676 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
P04436 RBBP8-205ENST00000399725 3260 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
P04436 TMEM116-213ENST00000550831 1446 ntAPPRIS P3 TSL 1 (best) BASIC8.19□□□□□ -1.1
P04436 CD226-207ENST00000582621 1458 ntAPPRIS P2 TSL 1 (best) BASIC8.19□□□□□ -1.1
P04436 TCF7L2-205ENST00000355717 1979 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
P04436 DNTT-202ENST00000630152 1954 ntAPPRIS ALT1 TSL 1 (best) BASIC8.19□□□□□ -1.1
P04436 MCTP2-203ENST00000451018 2472 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
P04436 ZNF317-202ENST00000360385 3955 ntAPPRIS ALT2 TSL 1 (best) BASIC8.19□□□□□ -1.1
P04436 ZMYND8-207ENST00000396281 5511 ntAPPRIS ALT2 TSL 2 BASIC8.19□□□□□ -1.1
P04436 AC025031.5-201ENST00000623851 2523 ntBASIC8.19□□□□□ -1.1
P04436 AC079174.2-201ENST00000611145 2028 ntBASIC8.19□□□□□ -1.1
P04436 ZNF30-201ENST00000303586 2579 ntAPPRIS P4 TSL 1 (best) BASIC8.18□□□□□ -1.1
P04436 ADGRF4-201ENST00000283303 3162 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
P04436 ARHGEF26-205ENST00000496710 3781 ntTSL 2 BASIC8.18□□□□□ -1.1
P04436 AL590004.4-201ENST00000566733 7060 ntBASIC8.18□□□□□ -1.1
P04436 AP002884.3-201ENST00000504610 2749 ntTSL 2 BASIC8.18□□□□□ -1.1
P04436 C3P1-202ENST00000497718 4954 ntBASIC8.18□□□□□ -1.1
P04436 PPARG-207ENST00000397015 1722 ntAPPRIS ALT1 TSL 1 (best) BASIC8.18□□□□□ -1.1
P04436 MAGEB16-202ENST00000399987 1736 ntAPPRIS P2 TSL 5 BASIC8.18□□□□□ -1.1
P04436 PAQR5-205ENST00000561153 2347 ntAPPRIS P1 TSL 5 BASIC8.18□□□□□ -1.1
P04436 ZNF610-209ENST00000616431 1772 ntAPPRIS P3 TSL 2 BASIC8.18□□□□□ -1.1
P04436 TMCC1-202ENST00000426664 5484 ntTSL 5 BASIC8.18□□□□□ -1.1
P04436 GGA3-202ENST00000538886 3766 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
P04436 FAM71B-201ENST00000302938 2515 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
P04436 RPE-201ENST00000354506 3165 ntTSL 2 BASIC8.18□□□□□ -1.1
P04436 CNFN-201ENST00000222032 523 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
P04436 PPP1R14D-201ENST00000299174 757 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
P04436 IL37-202ENST00000311328 652 ntAPPRIS ALT2 TSL 1 (best) BASIC8.18□□□□□ -1.1
P04436 OR10J5-201ENST00000334857 930 ntAPPRIS P1 BASIC8.18□□□□□ -1.1
P04436 SSX2-202ENST00000337502 1292 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 58.3 ms