Protein–RNA interactions for Protein: Q9Y5S2

CDC42BPB, Serine/threonine-protein kinase MRCK beta, humanhuman

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPBQ9Y5S2 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC31.28■■■□□ 2.6
CDC42BPBQ9Y5S2 C9orf163-202ENST00000624034 2573 ntBASIC31.28■■■□□ 2.6
CDC42BPBQ9Y5S2 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
CDC42BPBQ9Y5S2 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC31.28■■■□□ 2.6
CDC42BPBQ9Y5S2 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC31.28■■■□□ 2.6
CDC42BPBQ9Y5S2 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC31.28■■■□□ 2.6
CDC42BPBQ9Y5S2 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC31.28■■■□□ 2.6
CDC42BPBQ9Y5S2 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC31.28■■■□□ 2.6
CDC42BPBQ9Y5S2 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC31.28■■■□□ 2.6
CDC42BPBQ9Y5S2 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
CDC42BPBQ9Y5S2 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC31.28■■■□□ 2.6
CDC42BPBQ9Y5S2 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
CDC42BPBQ9Y5S2 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
CDC42BPBQ9Y5S2 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
CDC42BPBQ9Y5S2 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
CDC42BPBQ9Y5S2 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC31.27■■■□□ 2.6
CDC42BPBQ9Y5S2 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
CDC42BPBQ9Y5S2 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC31.27■■■□□ 2.6
CDC42BPBQ9Y5S2 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC31.27■■■□□ 2.6
CDC42BPBQ9Y5S2 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC31.27■■■□□ 2.6
CDC42BPBQ9Y5S2 RN7SL850P-201ENST00000579959 291 ntBASIC31.27■■■□□ 2.6
CDC42BPBQ9Y5S2 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC31.27■■■□□ 2.6
CDC42BPBQ9Y5S2 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
CDC42BPBQ9Y5S2 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
CDC42BPBQ9Y5S2 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
CDC42BPBQ9Y5S2 CABP2-204ENST00000636477 941 ntTSL 5 BASIC31.27■■■□□ 2.6
CDC42BPBQ9Y5S2 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC31.26■■■□□ 2.6
CDC42BPBQ9Y5S2 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC31.26■■■□□ 2.6
CDC42BPBQ9Y5S2 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
CDC42BPBQ9Y5S2 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
CDC42BPBQ9Y5S2 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
CDC42BPBQ9Y5S2 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
CDC42BPBQ9Y5S2 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC31.26■■■□□ 2.59
CDC42BPBQ9Y5S2 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC31.26■■■□□ 2.59
CDC42BPBQ9Y5S2 PRKY-204ENST00000533551 1019 ntBASIC31.26■■■□□ 2.59
CDC42BPBQ9Y5S2 AL353708.3-201ENST00000610272 989 ntBASIC31.26■■■□□ 2.59
CDC42BPBQ9Y5S2 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC31.25■■■□□ 2.59
CDC42BPBQ9Y5S2 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
CDC42BPBQ9Y5S2 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC31.25■■■□□ 2.59
CDC42BPBQ9Y5S2 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC31.25■■■□□ 2.59
CDC42BPBQ9Y5S2 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC31.24■■■□□ 2.59
CDC42BPBQ9Y5S2 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
CDC42BPBQ9Y5S2 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
CDC42BPBQ9Y5S2 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC31.24■■■□□ 2.59
CDC42BPBQ9Y5S2 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC31.24■■■□□ 2.59
CDC42BPBQ9Y5S2 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC31.24■■■□□ 2.59
CDC42BPBQ9Y5S2 BRWD1-AS2-201ENST00000603064 1028 ntBASIC31.24■■■□□ 2.59
CDC42BPBQ9Y5S2 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC31.24■■■□□ 2.59
CDC42BPBQ9Y5S2 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
CDC42BPBQ9Y5S2 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC31.24■■■□□ 2.59
CDC42BPBQ9Y5S2 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
CDC42BPBQ9Y5S2 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC31.24■■■□□ 2.59
CDC42BPBQ9Y5S2 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
CDC42BPBQ9Y5S2 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC31.24■■■□□ 2.59
CDC42BPBQ9Y5S2 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
CDC42BPBQ9Y5S2 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
CDC42BPBQ9Y5S2 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
CDC42BPBQ9Y5S2 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC31.23■■■□□ 2.59
CDC42BPBQ9Y5S2 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC31.23■■■□□ 2.59
CDC42BPBQ9Y5S2 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC31.23■■■□□ 2.59
CDC42BPBQ9Y5S2 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC31.23■■■□□ 2.59
CDC42BPBQ9Y5S2 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
CDC42BPBQ9Y5S2 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC31.23■■■□□ 2.59
CDC42BPBQ9Y5S2 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC31.23■■■□□ 2.59
CDC42BPBQ9Y5S2 AP001412.1-201ENST00000608405 714 ntBASIC31.23■■■□□ 2.59
CDC42BPBQ9Y5S2 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC31.23■■■□□ 2.59
CDC42BPBQ9Y5S2 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
CDC42BPBQ9Y5S2 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC31.23■■■□□ 2.59
CDC42BPBQ9Y5S2 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
CDC42BPBQ9Y5S2 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
CDC42BPBQ9Y5S2 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC31.23■■■□□ 2.59
CDC42BPBQ9Y5S2 MFF-203ENST00000349901 1716 ntTSL 2 BASIC31.22■■■□□ 2.59
CDC42BPBQ9Y5S2 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC31.22■■■□□ 2.59
CDC42BPBQ9Y5S2 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
CDC42BPBQ9Y5S2 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC31.22■■■□□ 2.59
CDC42BPBQ9Y5S2 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC31.22■■■□□ 2.59
CDC42BPBQ9Y5S2 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
CDC42BPBQ9Y5S2 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC31.22■■■□□ 2.59
CDC42BPBQ9Y5S2 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC31.21■■■□□ 2.59
CDC42BPBQ9Y5S2 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
CDC42BPBQ9Y5S2 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC31.21■■■□□ 2.59
CDC42BPBQ9Y5S2 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC31.21■■■□□ 2.59
CDC42BPBQ9Y5S2 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC31.21■■■□□ 2.59
CDC42BPBQ9Y5S2 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC31.21■■■□□ 2.59
CDC42BPBQ9Y5S2 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
CDC42BPBQ9Y5S2 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC31.21■■■□□ 2.59
CDC42BPBQ9Y5S2 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
CDC42BPBQ9Y5S2 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC31.21■■■□□ 2.59
CDC42BPBQ9Y5S2 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC31.21■■■□□ 2.59
CDC42BPBQ9Y5S2 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC31.21■■■□□ 2.59
CDC42BPBQ9Y5S2 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC31.21■■■□□ 2.59
CDC42BPBQ9Y5S2 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
CDC42BPBQ9Y5S2 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC31.2■■■□□ 2.59
CDC42BPBQ9Y5S2 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC31.2■■■□□ 2.59
CDC42BPBQ9Y5S2 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC31.2■■■□□ 2.59
CDC42BPBQ9Y5S2 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.59
CDC42BPBQ9Y5S2 ME2-208ENST00000638937 2471 ntTSL 5 BASIC31.2■■■□□ 2.59
CDC42BPBQ9Y5S2 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC31.2■■■□□ 2.58
CDC42BPBQ9Y5S2 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC31.2■■■□□ 2.58
CDC42BPBQ9Y5S2 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC31.2■■■□□ 2.58
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms