Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PCDHGA11Q9Y5H2 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PCDHGA11Q9Y5H2 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PCDHGA11Q9Y5H2 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PCDHGA11Q9Y5H2 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC19.81■□□□□ 0.76
PCDHGA11Q9Y5H2 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
PCDHGA11Q9Y5H2 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC19.81■□□□□ 0.76
PCDHGA11Q9Y5H2 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC19.81■□□□□ 0.76
PCDHGA11Q9Y5H2 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC19.81■□□□□ 0.76
PCDHGA11Q9Y5H2 UBE2DNL-204ENST00000602536 740 ntBASIC19.81■□□□□ 0.76
PCDHGA11Q9Y5H2 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC19.81■□□□□ 0.76
PCDHGA11Q9Y5H2 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC19.81■□□□□ 0.76
PCDHGA11Q9Y5H2 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
PCDHGA11Q9Y5H2 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
PCDHGA11Q9Y5H2 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PCDHGA11Q9Y5H2 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
PCDHGA11Q9Y5H2 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PCDHGA11Q9Y5H2 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
PCDHGA11Q9Y5H2 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
PCDHGA11Q9Y5H2 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PCDHGA11Q9Y5H2 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PCDHGA11Q9Y5H2 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC19.8■□□□□ 0.76
PCDHGA11Q9Y5H2 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
PCDHGA11Q9Y5H2 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC19.8■□□□□ 0.76
PCDHGA11Q9Y5H2 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
PCDHGA11Q9Y5H2 FP700111.2-201ENST00000619190 1892 ntBASIC19.8■□□□□ 0.76
PCDHGA11Q9Y5H2 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
PCDHGA11Q9Y5H2 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
PCDHGA11Q9Y5H2 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC19.8■□□□□ 0.76
PCDHGA11Q9Y5H2 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC19.8■□□□□ 0.76
PCDHGA11Q9Y5H2 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PCDHGA11Q9Y5H2 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC19.8■□□□□ 0.76
PCDHGA11Q9Y5H2 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC19.8■□□□□ 0.76
PCDHGA11Q9Y5H2 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
PCDHGA11Q9Y5H2 MYCNOS-205ENST00000641950 531 ntBASIC19.8■□□□□ 0.76
PCDHGA11Q9Y5H2 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
PCDHGA11Q9Y5H2 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC19.8■□□□□ 0.76
PCDHGA11Q9Y5H2 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
PCDHGA11Q9Y5H2 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PCDHGA11Q9Y5H2 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
PCDHGA11Q9Y5H2 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
PCDHGA11Q9Y5H2 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PCDHGA11Q9Y5H2 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC19.79■□□□□ 0.76
PCDHGA11Q9Y5H2 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PCDHGA11Q9Y5H2 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
PCDHGA11Q9Y5H2 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
PCDHGA11Q9Y5H2 PARP1-202ENST00000366792 553 ntTSL 3 BASIC19.79■□□□□ 0.76
PCDHGA11Q9Y5H2 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC19.79■□□□□ 0.76
PCDHGA11Q9Y5H2 AC091799.1-201ENST00000422823 811 ntBASIC19.79■□□□□ 0.76
PCDHGA11Q9Y5H2 CD44-222ENST00000526025 1052 ntTSL 2 BASIC19.79■□□□□ 0.76
PCDHGA11Q9Y5H2 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
PCDHGA11Q9Y5H2 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC19.79■□□□□ 0.76
PCDHGA11Q9Y5H2 AC027702.1-201ENST00000563810 1770 ntBASIC19.79■□□□□ 0.76
PCDHGA11Q9Y5H2 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC19.79■□□□□ 0.76
PCDHGA11Q9Y5H2 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
PCDHGA11Q9Y5H2 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
PCDHGA11Q9Y5H2 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
PCDHGA11Q9Y5H2 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PCDHGA11Q9Y5H2 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PCDHGA11Q9Y5H2 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC19.79■□□□□ 0.76
PCDHGA11Q9Y5H2 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
PCDHGA11Q9Y5H2 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
PCDHGA11Q9Y5H2 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
PCDHGA11Q9Y5H2 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC19.79■□□□□ 0.76
PCDHGA11Q9Y5H2 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
PCDHGA11Q9Y5H2 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC19.79■□□□□ 0.76
PCDHGA11Q9Y5H2 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
PCDHGA11Q9Y5H2 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PCDHGA11Q9Y5H2 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
PCDHGA11Q9Y5H2 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
PCDHGA11Q9Y5H2 BID-203ENST00000399765 1879 ntTSL 2 BASIC19.78■□□□□ 0.76
PCDHGA11Q9Y5H2 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC19.78■□□□□ 0.76
PCDHGA11Q9Y5H2 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PCDHGA11Q9Y5H2 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC19.78■□□□□ 0.76
PCDHGA11Q9Y5H2 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
PCDHGA11Q9Y5H2 AC026271.2-201ENST00000428091 497 ntBASIC19.78■□□□□ 0.76
PCDHGA11Q9Y5H2 RARRES2P6-201ENST00000567333 442 ntBASIC19.78■□□□□ 0.76
PCDHGA11Q9Y5H2 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC19.78■□□□□ 0.76
PCDHGA11Q9Y5H2 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
PCDHGA11Q9Y5H2 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
PCDHGA11Q9Y5H2 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC19.78■□□□□ 0.76
PCDHGA11Q9Y5H2 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
PCDHGA11Q9Y5H2 ADM-207ENST00000530439 1839 ntTSL 2 BASIC19.78■□□□□ 0.76
PCDHGA11Q9Y5H2 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PCDHGA11Q9Y5H2 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
PCDHGA11Q9Y5H2 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
PCDHGA11Q9Y5H2 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC19.77■□□□□ 0.76
PCDHGA11Q9Y5H2 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC19.77■□□□□ 0.76
PCDHGA11Q9Y5H2 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PCDHGA11Q9Y5H2 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
PCDHGA11Q9Y5H2 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
PCDHGA11Q9Y5H2 KRT18P11-201ENST00000435214 1283 ntBASIC19.77■□□□□ 0.76
PCDHGA11Q9Y5H2 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC19.77■□□□□ 0.76
PCDHGA11Q9Y5H2 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC19.77■□□□□ 0.76
PCDHGA11Q9Y5H2 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC19.77■□□□□ 0.76
PCDHGA11Q9Y5H2 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PCDHGA11Q9Y5H2 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
PCDHGA11Q9Y5H2 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC19.77■□□□□ 0.76
PCDHGA11Q9Y5H2 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC19.77■□□□□ 0.76
PCDHGA11Q9Y5H2 GABARAPL3-202ENST00000624044 1851 ntBASIC19.77■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms