Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC20.03■□□□□ 0.8
PCDHB11Q9Y5F2 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
PCDHB11Q9Y5F2 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC20.03■□□□□ 0.8
PCDHB11Q9Y5F2 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PCDHB11Q9Y5F2 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PCDHB11Q9Y5F2 BX276092.2-201ENST00000417668 665 ntBASIC20.03■□□□□ 0.8
PCDHB11Q9Y5F2 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC20.03■□□□□ 0.8
PCDHB11Q9Y5F2 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC20.03■□□□□ 0.8
PCDHB11Q9Y5F2 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC20.03■□□□□ 0.8
PCDHB11Q9Y5F2 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
PCDHB11Q9Y5F2 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PCDHB11Q9Y5F2 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PCDHB11Q9Y5F2 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PCDHB11Q9Y5F2 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
PCDHB11Q9Y5F2 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC20.03■□□□□ 0.8
PCDHB11Q9Y5F2 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
PCDHB11Q9Y5F2 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
PCDHB11Q9Y5F2 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
PCDHB11Q9Y5F2 AC091799.1-201ENST00000422823 811 ntBASIC20.02■□□□□ 0.8
PCDHB11Q9Y5F2 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC20.02■□□□□ 0.8
PCDHB11Q9Y5F2 AC097658.1-201ENST00000475555 843 ntBASIC20.02■□□□□ 0.8
PCDHB11Q9Y5F2 PBX1-209ENST00000485769 834 ntTSL 2 BASIC20.02■□□□□ 0.8
PCDHB11Q9Y5F2 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC20.02■□□□□ 0.8
PCDHB11Q9Y5F2 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC20.02■□□□□ 0.8
PCDHB11Q9Y5F2 PLLP-204ENST00000569059 665 ntTSL 3 BASIC20.02■□□□□ 0.8
PCDHB11Q9Y5F2 AC016405.3-201ENST00000607710 860 ntBASIC20.02■□□□□ 0.8
PCDHB11Q9Y5F2 MARS-234ENST00000630571 216 ntTSL 5 BASIC20.02■□□□□ 0.8
PCDHB11Q9Y5F2 MARS-235ENST00000630803 183 ntTSL 3 BASIC20.02■□□□□ 0.8
PCDHB11Q9Y5F2 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
PCDHB11Q9Y5F2 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
PCDHB11Q9Y5F2 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC20.02■□□□□ 0.8
PCDHB11Q9Y5F2 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PCDHB11Q9Y5F2 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
PCDHB11Q9Y5F2 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PCDHB11Q9Y5F2 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
PCDHB11Q9Y5F2 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC20.02■□□□□ 0.79
PCDHB11Q9Y5F2 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
PCDHB11Q9Y5F2 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.79
PCDHB11Q9Y5F2 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
PCDHB11Q9Y5F2 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC20.02■□□□□ 0.79
PCDHB11Q9Y5F2 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
PCDHB11Q9Y5F2 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
PCDHB11Q9Y5F2 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PCDHB11Q9Y5F2 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PCDHB11Q9Y5F2 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PCDHB11Q9Y5F2 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
PCDHB11Q9Y5F2 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
PCDHB11Q9Y5F2 RHEB-204ENST00000472642 900 ntTSL 3 BASIC20.01■□□□□ 0.79
PCDHB11Q9Y5F2 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PCDHB11Q9Y5F2 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
PCDHB11Q9Y5F2 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC20.01■□□□□ 0.79
PCDHB11Q9Y5F2 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC20■□□□□ 0.79
PCDHB11Q9Y5F2 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC20■□□□□ 0.79
PCDHB11Q9Y5F2 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
PCDHB11Q9Y5F2 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC20■□□□□ 0.79
PCDHB11Q9Y5F2 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC20■□□□□ 0.79
PCDHB11Q9Y5F2 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC20■□□□□ 0.79
PCDHB11Q9Y5F2 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
PCDHB11Q9Y5F2 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
PCDHB11Q9Y5F2 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
PCDHB11Q9Y5F2 PTPA-214ENST00000423100 988 ntTSL 2 BASIC20■□□□□ 0.79
PCDHB11Q9Y5F2 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC20■□□□□ 0.79
PCDHB11Q9Y5F2 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC20■□□□□ 0.79
PCDHB11Q9Y5F2 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC20■□□□□ 0.79
PCDHB11Q9Y5F2 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
PCDHB11Q9Y5F2 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
PCDHB11Q9Y5F2 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PCDHB11Q9Y5F2 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC20■□□□□ 0.79
PCDHB11Q9Y5F2 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC19.99■□□□□ 0.79
PCDHB11Q9Y5F2 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC19.99■□□□□ 0.79
PCDHB11Q9Y5F2 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PCDHB11Q9Y5F2 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
PCDHB11Q9Y5F2 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PCDHB11Q9Y5F2 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC19.99■□□□□ 0.79
PCDHB11Q9Y5F2 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC19.99■□□□□ 0.79
PCDHB11Q9Y5F2 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC19.99■□□□□ 0.79
PCDHB11Q9Y5F2 AC093787.1-201ENST00000450396 207 ntBASIC19.99■□□□□ 0.79
PCDHB11Q9Y5F2 CDV3P1-201ENST00000471403 739 ntBASIC19.99■□□□□ 0.79
PCDHB11Q9Y5F2 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC19.99■□□□□ 0.79
PCDHB11Q9Y5F2 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC19.99■□□□□ 0.79
PCDHB11Q9Y5F2 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC19.99■□□□□ 0.79
PCDHB11Q9Y5F2 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC19.99■□□□□ 0.79
PCDHB11Q9Y5F2 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC19.99■□□□□ 0.79
PCDHB11Q9Y5F2 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PCDHB11Q9Y5F2 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
PCDHB11Q9Y5F2 EXOC3-AS1-202ENST00000623673 1663 ntBASIC19.99■□□□□ 0.79
PCDHB11Q9Y5F2 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC19.99■□□□□ 0.79
PCDHB11Q9Y5F2 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
PCDHB11Q9Y5F2 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
PCDHB11Q9Y5F2 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
PCDHB11Q9Y5F2 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC19.98■□□□□ 0.79
PCDHB11Q9Y5F2 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PCDHB11Q9Y5F2 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
PCDHB11Q9Y5F2 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PCDHB11Q9Y5F2 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PCDHB11Q9Y5F2 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
PCDHB11Q9Y5F2 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
PCDHB11Q9Y5F2 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
PCDHB11Q9Y5F2 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC19.98■□□□□ 0.79
PCDHB11Q9Y5F2 ISCU-212ENST00000547005 795 ntTSL 3 BASIC19.98■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms