Protein–RNA interactions for Protein: Q9Y5F0

PCDHB13, Protocadherin beta-13, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB13Q9Y5F0 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
PCDHB13Q9Y5F0 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC22.58■■□□□ 1.21
PCDHB13Q9Y5F0 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
PCDHB13Q9Y5F0 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC22.58■■□□□ 1.21
PCDHB13Q9Y5F0 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC22.58■■□□□ 1.21
PCDHB13Q9Y5F0 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC22.58■■□□□ 1.21
PCDHB13Q9Y5F0 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC22.58■■□□□ 1.21
PCDHB13Q9Y5F0 RAP2CP1-201ENST00000605103 478 ntBASIC22.58■■□□□ 1.21
PCDHB13Q9Y5F0 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC22.58■■□□□ 1.21
PCDHB13Q9Y5F0 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC22.58■■□□□ 1.2
PCDHB13Q9Y5F0 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC22.58■■□□□ 1.2
PCDHB13Q9Y5F0 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
PCDHB13Q9Y5F0 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC22.58■■□□□ 1.2
PCDHB13Q9Y5F0 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC22.57■■□□□ 1.2
PCDHB13Q9Y5F0 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC22.57■■□□□ 1.2
PCDHB13Q9Y5F0 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
PCDHB13Q9Y5F0 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
PCDHB13Q9Y5F0 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC22.57■■□□□ 1.2
PCDHB13Q9Y5F0 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
PCDHB13Q9Y5F0 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
PCDHB13Q9Y5F0 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC22.57■■□□□ 1.2
PCDHB13Q9Y5F0 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC22.57■■□□□ 1.2
PCDHB13Q9Y5F0 CYP2T1P-201ENST00000432607 1285 ntBASIC22.57■■□□□ 1.2
PCDHB13Q9Y5F0 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
PCDHB13Q9Y5F0 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC22.57■■□□□ 1.2
PCDHB13Q9Y5F0 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC22.57■■□□□ 1.2
PCDHB13Q9Y5F0 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC22.57■■□□□ 1.2
PCDHB13Q9Y5F0 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
PCDHB13Q9Y5F0 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC22.57■■□□□ 1.2
PCDHB13Q9Y5F0 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC22.57■■□□□ 1.2
PCDHB13Q9Y5F0 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
PCDHB13Q9Y5F0 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC22.57■■□□□ 1.2
PCDHB13Q9Y5F0 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
PCDHB13Q9Y5F0 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC22.57■■□□□ 1.2
PCDHB13Q9Y5F0 FP700111.2-201ENST00000619190 1892 ntBASIC22.57■■□□□ 1.2
PCDHB13Q9Y5F0 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
PCDHB13Q9Y5F0 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
PCDHB13Q9Y5F0 AL157384.1-201ENST00000445995 2473 ntBASIC22.57■■□□□ 1.2
PCDHB13Q9Y5F0 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
PCDHB13Q9Y5F0 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
PCDHB13Q9Y5F0 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
PCDHB13Q9Y5F0 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
PCDHB13Q9Y5F0 ME2-216ENST00000639850 2331 ntTSL 5 BASIC22.57■■□□□ 1.2
PCDHB13Q9Y5F0 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC22.56■■□□□ 1.2
PCDHB13Q9Y5F0 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC22.56■■□□□ 1.2
PCDHB13Q9Y5F0 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
PCDHB13Q9Y5F0 DCD-201ENST00000293371 645 ntAPPRIS P3 TSL 1 (best) BASIC22.56■■□□□ 1.2
PCDHB13Q9Y5F0 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC22.56■■□□□ 1.2
PCDHB13Q9Y5F0 AC100791.3-201ENST00000617619 330 ntBASIC22.56■■□□□ 1.2
PCDHB13Q9Y5F0 OR10C1-204ENST00000622521 1039 ntBASIC22.56■■□□□ 1.2
PCDHB13Q9Y5F0 MIR2861-201ENST00000636310 90 ntBASIC22.56■■□□□ 1.2
PCDHB13Q9Y5F0 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC22.56■■□□□ 1.2
PCDHB13Q9Y5F0 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
PCDHB13Q9Y5F0 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
PCDHB13Q9Y5F0 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC22.56■■□□□ 1.2
PCDHB13Q9Y5F0 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC22.56■■□□□ 1.2
PCDHB13Q9Y5F0 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
PCDHB13Q9Y5F0 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC22.56■■□□□ 1.2
PCDHB13Q9Y5F0 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC22.56■■□□□ 1.2
PCDHB13Q9Y5F0 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC22.55■■□□□ 1.2
PCDHB13Q9Y5F0 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
PCDHB13Q9Y5F0 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC22.55■■□□□ 1.2
PCDHB13Q9Y5F0 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
PCDHB13Q9Y5F0 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC22.55■■□□□ 1.2
PCDHB13Q9Y5F0 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
PCDHB13Q9Y5F0 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC22.55■■□□□ 1.2
PCDHB13Q9Y5F0 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC22.55■■□□□ 1.2
PCDHB13Q9Y5F0 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC22.55■■□□□ 1.2
PCDHB13Q9Y5F0 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
PCDHB13Q9Y5F0 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC22.55■■□□□ 1.2
PCDHB13Q9Y5F0 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
PCDHB13Q9Y5F0 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC22.55■■□□□ 1.2
PCDHB13Q9Y5F0 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC22.55■■□□□ 1.2
PCDHB13Q9Y5F0 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC22.55■■□□□ 1.2
PCDHB13Q9Y5F0 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
PCDHB13Q9Y5F0 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
PCDHB13Q9Y5F0 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
PCDHB13Q9Y5F0 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC22.55■■□□□ 1.2
PCDHB13Q9Y5F0 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
PCDHB13Q9Y5F0 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
PCDHB13Q9Y5F0 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
PCDHB13Q9Y5F0 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC22.54■■□□□ 1.2
PCDHB13Q9Y5F0 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
PCDHB13Q9Y5F0 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC22.54■■□□□ 1.2
PCDHB13Q9Y5F0 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
PCDHB13Q9Y5F0 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
PCDHB13Q9Y5F0 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC22.54■■□□□ 1.2
PCDHB13Q9Y5F0 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC22.54■■□□□ 1.2
PCDHB13Q9Y5F0 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC22.54■■□□□ 1.2
PCDHB13Q9Y5F0 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
PCDHB13Q9Y5F0 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
PCDHB13Q9Y5F0 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
PCDHB13Q9Y5F0 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC22.53■■□□□ 1.2
PCDHB13Q9Y5F0 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC22.53■■□□□ 1.2
PCDHB13Q9Y5F0 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC22.53■■□□□ 1.2
PCDHB13Q9Y5F0 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
PCDHB13Q9Y5F0 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
PCDHB13Q9Y5F0 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
PCDHB13Q9Y5F0 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC22.53■■□□□ 1.2
PCDHB13Q9Y5F0 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms