Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC23.68■■□□□ 1.38
CTDP1Q9Y5B0 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
CTDP1Q9Y5B0 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
CTDP1Q9Y5B0 BAALC-201ENST00000297574 801 ntTSL 3 BASIC23.67■■□□□ 1.38
CTDP1Q9Y5B0 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
CTDP1Q9Y5B0 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC23.67■■□□□ 1.38
CTDP1Q9Y5B0 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
CTDP1Q9Y5B0 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC23.67■■□□□ 1.38
CTDP1Q9Y5B0 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC23.67■■□□□ 1.38
CTDP1Q9Y5B0 C2orf69P4-201ENST00000565394 541 ntBASIC23.67■■□□□ 1.38
CTDP1Q9Y5B0 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
CTDP1Q9Y5B0 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC23.66■■□□□ 1.38
CTDP1Q9Y5B0 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC23.66■■□□□ 1.38
CTDP1Q9Y5B0 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
CTDP1Q9Y5B0 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC23.66■■□□□ 1.38
CTDP1Q9Y5B0 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
CTDP1Q9Y5B0 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC23.66■■□□□ 1.38
CTDP1Q9Y5B0 SOX15-203ENST00000570788 1093 ntBASIC23.66■■□□□ 1.38
CTDP1Q9Y5B0 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC23.66■■□□□ 1.38
CTDP1Q9Y5B0 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC23.66■■□□□ 1.38
CTDP1Q9Y5B0 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC23.66■■□□□ 1.38
CTDP1Q9Y5B0 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
CTDP1Q9Y5B0 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC23.66■■□□□ 1.38
CTDP1Q9Y5B0 PALM-207ENST00000590161 2137 ntTSL 4 BASIC23.66■■□□□ 1.38
CTDP1Q9Y5B0 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
CTDP1Q9Y5B0 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
CTDP1Q9Y5B0 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC23.66■■□□□ 1.38
CTDP1Q9Y5B0 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC23.66■■□□□ 1.38
CTDP1Q9Y5B0 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC23.65■■□□□ 1.38
CTDP1Q9Y5B0 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC23.65■■□□□ 1.38
CTDP1Q9Y5B0 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC23.65■■□□□ 1.38
CTDP1Q9Y5B0 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
CTDP1Q9Y5B0 EXOC3-AS1-202ENST00000623673 1663 ntBASIC23.65■■□□□ 1.38
CTDP1Q9Y5B0 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
CTDP1Q9Y5B0 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
CTDP1Q9Y5B0 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC23.65■■□□□ 1.38
CTDP1Q9Y5B0 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC23.65■■□□□ 1.38
CTDP1Q9Y5B0 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC23.65■■□□□ 1.38
CTDP1Q9Y5B0 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC23.65■■□□□ 1.38
CTDP1Q9Y5B0 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
CTDP1Q9Y5B0 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC23.65■■□□□ 1.38
CTDP1Q9Y5B0 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC23.65■■□□□ 1.38
CTDP1Q9Y5B0 AL117328.2-201ENST00000624617 1940 ntBASIC23.65■■□□□ 1.38
CTDP1Q9Y5B0 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC23.64■■□□□ 1.38
CTDP1Q9Y5B0 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
CTDP1Q9Y5B0 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
CTDP1Q9Y5B0 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
CTDP1Q9Y5B0 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
CTDP1Q9Y5B0 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
CTDP1Q9Y5B0 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC23.64■■□□□ 1.37
CTDP1Q9Y5B0 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC23.64■■□□□ 1.37
CTDP1Q9Y5B0 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC23.64■■□□□ 1.37
CTDP1Q9Y5B0 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
CTDP1Q9Y5B0 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC23.64■■□□□ 1.37
CTDP1Q9Y5B0 AC008403.3-201ENST00000598924 454 ntBASIC23.64■■□□□ 1.37
CTDP1Q9Y5B0 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
CTDP1Q9Y5B0 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
CTDP1Q9Y5B0 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
CTDP1Q9Y5B0 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC23.63■■□□□ 1.37
CTDP1Q9Y5B0 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
CTDP1Q9Y5B0 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC23.63■■□□□ 1.37
CTDP1Q9Y5B0 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
CTDP1Q9Y5B0 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
CTDP1Q9Y5B0 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
CTDP1Q9Y5B0 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC23.63■■□□□ 1.37
CTDP1Q9Y5B0 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
CTDP1Q9Y5B0 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC23.63■■□□□ 1.37
CTDP1Q9Y5B0 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC23.63■■□□□ 1.37
CTDP1Q9Y5B0 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC23.63■■□□□ 1.37
CTDP1Q9Y5B0 BRWD1-AS2-201ENST00000603064 1028 ntBASIC23.63■■□□□ 1.37
CTDP1Q9Y5B0 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC23.63■■□□□ 1.37
CTDP1Q9Y5B0 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC23.63■■□□□ 1.37
CTDP1Q9Y5B0 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC23.63■■□□□ 1.37
CTDP1Q9Y5B0 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
CTDP1Q9Y5B0 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
CTDP1Q9Y5B0 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
CTDP1Q9Y5B0 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC23.62■■□□□ 1.37
CTDP1Q9Y5B0 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
CTDP1Q9Y5B0 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC23.62■■□□□ 1.37
CTDP1Q9Y5B0 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC23.62■■□□□ 1.37
CTDP1Q9Y5B0 AL356652.1-201ENST00000615962 565 ntBASIC23.62■■□□□ 1.37
CTDP1Q9Y5B0 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC23.62■■□□□ 1.37
CTDP1Q9Y5B0 FAM197Y4-202ENST00000622692 608 ntBASIC23.62■■□□□ 1.37
CTDP1Q9Y5B0 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC23.62■■□□□ 1.37
CTDP1Q9Y5B0 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
CTDP1Q9Y5B0 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
CTDP1Q9Y5B0 AC244015.2-201ENST00000616358 1861 ntBASIC23.62■■□□□ 1.37
CTDP1Q9Y5B0 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
CTDP1Q9Y5B0 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
CTDP1Q9Y5B0 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC23.61■■□□□ 1.37
CTDP1Q9Y5B0 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
CTDP1Q9Y5B0 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
CTDP1Q9Y5B0 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
CTDP1Q9Y5B0 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC23.61■■□□□ 1.37
CTDP1Q9Y5B0 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC23.61■■□□□ 1.37
CTDP1Q9Y5B0 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC23.61■■□□□ 1.37
CTDP1Q9Y5B0 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC23.61■■□□□ 1.37
CTDP1Q9Y5B0 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
CTDP1Q9Y5B0 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC23.61■■□□□ 1.37
CTDP1Q9Y5B0 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC23.61■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms