Protein–RNA interactions for Protein: Q9UNN4

GTF2A1L, TFIIA-alpha and beta-like factor, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1LQ9UNN4 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
GTF2A1LQ9UNN4 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC18.21■□□□□ 0.51
GTF2A1LQ9UNN4 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.5
GTF2A1LQ9UNN4 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC18.21■□□□□ 0.5
GTF2A1LQ9UNN4 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC18.2■□□□□ 0.5
GTF2A1LQ9UNN4 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
GTF2A1LQ9UNN4 FP700111.2-201ENST00000619190 1892 ntBASIC18.2■□□□□ 0.5
GTF2A1LQ9UNN4 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
GTF2A1LQ9UNN4 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC18.2■□□□□ 0.5
GTF2A1LQ9UNN4 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
GTF2A1LQ9UNN4 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
GTF2A1LQ9UNN4 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
GTF2A1LQ9UNN4 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC18.2■□□□□ 0.5
GTF2A1LQ9UNN4 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC18.2■□□□□ 0.5
GTF2A1LQ9UNN4 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC18.2■□□□□ 0.5
GTF2A1LQ9UNN4 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC18.2■□□□□ 0.5
GTF2A1LQ9UNN4 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC18.2■□□□□ 0.5
GTF2A1LQ9UNN4 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
GTF2A1LQ9UNN4 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC18.2■□□□□ 0.5
GTF2A1LQ9UNN4 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
GTF2A1LQ9UNN4 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
GTF2A1LQ9UNN4 MPST-204ENST00000404393 1329 ntTSL 5 BASIC18.2■□□□□ 0.5
GTF2A1LQ9UNN4 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
GTF2A1LQ9UNN4 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
GTF2A1LQ9UNN4 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC18.2■□□□□ 0.5
GTF2A1LQ9UNN4 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC18.2■□□□□ 0.5
GTF2A1LQ9UNN4 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
GTF2A1LQ9UNN4 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
GTF2A1LQ9UNN4 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC18.19■□□□□ 0.5
GTF2A1LQ9UNN4 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
GTF2A1LQ9UNN4 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
GTF2A1LQ9UNN4 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
GTF2A1LQ9UNN4 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC18.19■□□□□ 0.5
GTF2A1LQ9UNN4 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
GTF2A1LQ9UNN4 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
GTF2A1LQ9UNN4 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
GTF2A1LQ9UNN4 EBPL-204ENST00000378272 766 ntTSL 3 BASIC18.19■□□□□ 0.5
GTF2A1LQ9UNN4 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
GTF2A1LQ9UNN4 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC18.19■□□□□ 0.5
GTF2A1LQ9UNN4 AC020763.4-201ENST00000623414 4170 ntBASIC18.19■□□□□ 0.5
GTF2A1LQ9UNN4 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
GTF2A1LQ9UNN4 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
GTF2A1LQ9UNN4 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC18.19■□□□□ 0.5
GTF2A1LQ9UNN4 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC18.19■□□□□ 0.5
GTF2A1LQ9UNN4 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC18.19■□□□□ 0.5
GTF2A1LQ9UNN4 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
GTF2A1LQ9UNN4 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
GTF2A1LQ9UNN4 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
GTF2A1LQ9UNN4 AC007225.1-201ENST00000566331 1836 ntBASIC18.19■□□□□ 0.5
GTF2A1LQ9UNN4 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC18.18■□□□□ 0.5
GTF2A1LQ9UNN4 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
GTF2A1LQ9UNN4 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
GTF2A1LQ9UNN4 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
GTF2A1LQ9UNN4 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
GTF2A1LQ9UNN4 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
GTF2A1LQ9UNN4 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
GTF2A1LQ9UNN4 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
GTF2A1LQ9UNN4 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
GTF2A1LQ9UNN4 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
GTF2A1LQ9UNN4 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
GTF2A1LQ9UNN4 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
GTF2A1LQ9UNN4 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
GTF2A1LQ9UNN4 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
GTF2A1LQ9UNN4 NALT1-201ENST00000429224 738 ntTSL 5 BASIC18.18■□□□□ 0.5
GTF2A1LQ9UNN4 AC091305.1-201ENST00000479476 895 ntBASIC18.18■□□□□ 0.5
GTF2A1LQ9UNN4 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC18.18■□□□□ 0.5
GTF2A1LQ9UNN4 AC110285.6-201ENST00000617652 491 ntBASIC18.18■□□□□ 0.5
GTF2A1LQ9UNN4 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
GTF2A1LQ9UNN4 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
GTF2A1LQ9UNN4 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
GTF2A1LQ9UNN4 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
GTF2A1LQ9UNN4 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
GTF2A1LQ9UNN4 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
GTF2A1LQ9UNN4 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
GTF2A1LQ9UNN4 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
GTF2A1LQ9UNN4 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
GTF2A1LQ9UNN4 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
GTF2A1LQ9UNN4 AL121603.2-201ENST00000557373 2117 ntBASIC18.17■□□□□ 0.5
GTF2A1LQ9UNN4 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
GTF2A1LQ9UNN4 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
GTF2A1LQ9UNN4 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
GTF2A1LQ9UNN4 AC027702.1-201ENST00000563810 1770 ntBASIC18.17■□□□□ 0.5
GTF2A1LQ9UNN4 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC18.17■□□□□ 0.5
GTF2A1LQ9UNN4 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
GTF2A1LQ9UNN4 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
GTF2A1LQ9UNN4 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC18.17■□□□□ 0.5
GTF2A1LQ9UNN4 MIR939-201ENST00000401314 82 ntBASIC18.17■□□□□ 0.5
GTF2A1LQ9UNN4 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC18.17■□□□□ 0.5
GTF2A1LQ9UNN4 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC18.17■□□□□ 0.5
GTF2A1LQ9UNN4 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC18.17■□□□□ 0.5
GTF2A1LQ9UNN4 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC18.17■□□□□ 0.5
GTF2A1LQ9UNN4 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC18.17■□□□□ 0.5
GTF2A1LQ9UNN4 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC18.17■□□□□ 0.5
GTF2A1LQ9UNN4 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
GTF2A1LQ9UNN4 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
GTF2A1LQ9UNN4 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
GTF2A1LQ9UNN4 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC18.17■□□□□ 0.5
GTF2A1LQ9UNN4 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
GTF2A1LQ9UNN4 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC18.17■□□□□ 0.5
GTF2A1LQ9UNN4 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms