Protein–RNA interactions for Protein: Q9UN66

PCDHB8, Protocadherin beta-8, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB8Q9UN66 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
PCDHB8Q9UN66 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
PCDHB8Q9UN66 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PCDHB8Q9UN66 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
PCDHB8Q9UN66 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC21.8■■□□□ 1.08
PCDHB8Q9UN66 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC21.8■■□□□ 1.08
PCDHB8Q9UN66 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
PCDHB8Q9UN66 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PCDHB8Q9UN66 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC21.79■■□□□ 1.08
PCDHB8Q9UN66 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
PCDHB8Q9UN66 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
PCDHB8Q9UN66 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
PCDHB8Q9UN66 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
PCDHB8Q9UN66 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
PCDHB8Q9UN66 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC21.79■■□□□ 1.08
PCDHB8Q9UN66 AC128676.1-201ENST00000454392 318 ntBASIC21.79■■□□□ 1.08
PCDHB8Q9UN66 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
PCDHB8Q9UN66 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC21.79■■□□□ 1.08
PCDHB8Q9UN66 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC21.79■■□□□ 1.08
PCDHB8Q9UN66 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
PCDHB8Q9UN66 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PCDHB8Q9UN66 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC21.79■■□□□ 1.08
PCDHB8Q9UN66 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
PCDHB8Q9UN66 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC21.78■■□□□ 1.08
PCDHB8Q9UN66 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
PCDHB8Q9UN66 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
PCDHB8Q9UN66 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
PCDHB8Q9UN66 STAC-204ENST00000457375 1366 ntTSL 2 BASIC21.78■■□□□ 1.08
PCDHB8Q9UN66 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC21.78■■□□□ 1.08
PCDHB8Q9UN66 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PCDHB8Q9UN66 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PCDHB8Q9UN66 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PCDHB8Q9UN66 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC21.78■■□□□ 1.08
PCDHB8Q9UN66 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC21.78■■□□□ 1.08
PCDHB8Q9UN66 UNC93B4-201ENST00000505679 747 ntBASIC21.78■■□□□ 1.08
PCDHB8Q9UN66 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PCDHB8Q9UN66 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
PCDHB8Q9UN66 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC21.78■■□□□ 1.08
PCDHB8Q9UN66 BRWD1-AS2-201ENST00000603064 1028 ntBASIC21.78■■□□□ 1.08
PCDHB8Q9UN66 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PCDHB8Q9UN66 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PCDHB8Q9UN66 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC21.78■■□□□ 1.08
PCDHB8Q9UN66 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
PCDHB8Q9UN66 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
PCDHB8Q9UN66 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PCDHB8Q9UN66 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
PCDHB8Q9UN66 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
PCDHB8Q9UN66 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
PCDHB8Q9UN66 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PCDHB8Q9UN66 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC21.77■■□□□ 1.08
PCDHB8Q9UN66 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC21.77■■□□□ 1.08
PCDHB8Q9UN66 SLC29A4P2-201ENST00000504749 1089 ntBASIC21.77■■□□□ 1.08
PCDHB8Q9UN66 REXO2-208ENST00000539754 791 ntTSL 2 BASIC21.77■■□□□ 1.08
PCDHB8Q9UN66 LINC02536-201ENST00000625799 625 ntTSL 3 BASIC21.77■■□□□ 1.08
PCDHB8Q9UN66 AC066615.1-201ENST00000640911 628 ntBASIC21.77■■□□□ 1.08
PCDHB8Q9UN66 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
PCDHB8Q9UN66 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.07
PCDHB8Q9UN66 AC027702.1-201ENST00000563810 1770 ntBASIC21.76■■□□□ 1.07
PCDHB8Q9UN66 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
PCDHB8Q9UN66 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
PCDHB8Q9UN66 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PCDHB8Q9UN66 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PCDHB8Q9UN66 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PCDHB8Q9UN66 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC21.76■■□□□ 1.07
PCDHB8Q9UN66 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
PCDHB8Q9UN66 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PCDHB8Q9UN66 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
PCDHB8Q9UN66 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
PCDHB8Q9UN66 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC21.76■■□□□ 1.07
PCDHB8Q9UN66 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
PCDHB8Q9UN66 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC21.76■■□□□ 1.07
PCDHB8Q9UN66 OR2A1-AS1-207ENST00000486094 819 ntBASIC21.76■■□□□ 1.07
PCDHB8Q9UN66 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
PCDHB8Q9UN66 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC21.76■■□□□ 1.07
PCDHB8Q9UN66 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC21.76■■□□□ 1.07
PCDHB8Q9UN66 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC21.76■■□□□ 1.07
PCDHB8Q9UN66 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
PCDHB8Q9UN66 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
PCDHB8Q9UN66 AC073648.6-201ENST00000641589 218 ntBASIC21.76■■□□□ 1.07
PCDHB8Q9UN66 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
PCDHB8Q9UN66 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PCDHB8Q9UN66 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC21.76■■□□□ 1.07
PCDHB8Q9UN66 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
PCDHB8Q9UN66 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
PCDHB8Q9UN66 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC21.75■■□□□ 1.07
PCDHB8Q9UN66 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PCDHB8Q9UN66 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
PCDHB8Q9UN66 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC21.75■■□□□ 1.07
PCDHB8Q9UN66 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PCDHB8Q9UN66 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PCDHB8Q9UN66 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
PCDHB8Q9UN66 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC21.75■■□□□ 1.07
PCDHB8Q9UN66 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
PCDHB8Q9UN66 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC21.75■■□□□ 1.07
PCDHB8Q9UN66 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PCDHB8Q9UN66 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
PCDHB8Q9UN66 AC098590.1-201ENST00000468126 897 ntBASIC21.75■■□□□ 1.07
PCDHB8Q9UN66 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PCDHB8Q9UN66 SOX15-203ENST00000570788 1093 ntBASIC21.75■■□□□ 1.07
PCDHB8Q9UN66 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms