Protein–RNA interactions for Protein: Q9ULB4

CDH9, Cadherin-9, humanhuman

Predictions only

Length 789 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9Q9ULB4 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CDH9Q9ULB4 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC21.68■■□□□ 1.06
CDH9Q9ULB4 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC21.68■■□□□ 1.06
CDH9Q9ULB4 GATS-209ENST00000454084 1030 ntTSL 3 BASIC21.68■■□□□ 1.06
CDH9Q9ULB4 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC21.68■■□□□ 1.06
CDH9Q9ULB4 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC21.68■■□□□ 1.06
CDH9Q9ULB4 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CDH9Q9ULB4 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC21.68■■□□□ 1.06
CDH9Q9ULB4 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CDH9Q9ULB4 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CDH9Q9ULB4 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CDH9Q9ULB4 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CDH9Q9ULB4 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CDH9Q9ULB4 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
CDH9Q9ULB4 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC21.68■■□□□ 1.06
CDH9Q9ULB4 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
CDH9Q9ULB4 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
CDH9Q9ULB4 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CDH9Q9ULB4 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CDH9Q9ULB4 ERF-202ENST00000440177 2032 ntTSL 2 BASIC21.67■■□□□ 1.06
CDH9Q9ULB4 PLK5-205ENST00000642079 1969 ntBASIC21.67■■□□□ 1.06
CDH9Q9ULB4 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC21.67■■□□□ 1.06
CDH9Q9ULB4 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CDH9Q9ULB4 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CDH9Q9ULB4 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
CDH9Q9ULB4 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
CDH9Q9ULB4 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC21.67■■□□□ 1.06
CDH9Q9ULB4 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC21.67■■□□□ 1.06
CDH9Q9ULB4 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CDH9Q9ULB4 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CDH9Q9ULB4 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
CDH9Q9ULB4 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC21.67■■□□□ 1.06
CDH9Q9ULB4 C2orf69P4-201ENST00000565394 541 ntBASIC21.67■■□□□ 1.06
CDH9Q9ULB4 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC21.67■■□□□ 1.06
CDH9Q9ULB4 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CDH9Q9ULB4 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
CDH9Q9ULB4 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CDH9Q9ULB4 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
CDH9Q9ULB4 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CDH9Q9ULB4 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CDH9Q9ULB4 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CDH9Q9ULB4 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CDH9Q9ULB4 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
CDH9Q9ULB4 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CDH9Q9ULB4 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CDH9Q9ULB4 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC21.66■■□□□ 1.06
CDH9Q9ULB4 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CDH9Q9ULB4 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CDH9Q9ULB4 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
CDH9Q9ULB4 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CDH9Q9ULB4 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
CDH9Q9ULB4 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CDH9Q9ULB4 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
CDH9Q9ULB4 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CDH9Q9ULB4 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CDH9Q9ULB4 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
CDH9Q9ULB4 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CDH9Q9ULB4 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CDH9Q9ULB4 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC21.65■■□□□ 1.06
CDH9Q9ULB4 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC21.65■■□□□ 1.06
CDH9Q9ULB4 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC21.65■■□□□ 1.06
CDH9Q9ULB4 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC21.65■■□□□ 1.06
CDH9Q9ULB4 INO80E-214ENST00000620599 515 ntTSL 2 BASIC21.65■■□□□ 1.06
CDH9Q9ULB4 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
CDH9Q9ULB4 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC21.65■■□□□ 1.06
CDH9Q9ULB4 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
CDH9Q9ULB4 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CDH9Q9ULB4 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC21.65■■□□□ 1.06
CDH9Q9ULB4 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CDH9Q9ULB4 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
CDH9Q9ULB4 KRT8P36-201ENST00000489121 1440 ntBASIC21.64■■□□□ 1.06
CDH9Q9ULB4 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC21.64■■□□□ 1.06
CDH9Q9ULB4 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CDH9Q9ULB4 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC21.64■■□□□ 1.05
CDH9Q9ULB4 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC21.64■■□□□ 1.05
CDH9Q9ULB4 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC21.64■■□□□ 1.05
CDH9Q9ULB4 MIR4651-201ENST00000582622 73 ntBASIC21.64■■□□□ 1.05
CDH9Q9ULB4 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC21.64■■□□□ 1.05
CDH9Q9ULB4 HLA-B-256ENST00000639848 1089 ntBASIC21.64■■□□□ 1.05
CDH9Q9ULB4 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC21.64■■□□□ 1.05
CDH9Q9ULB4 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
CDH9Q9ULB4 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC21.64■■□□□ 1.05
CDH9Q9ULB4 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CDH9Q9ULB4 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC21.63■■□□□ 1.05
CDH9Q9ULB4 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CDH9Q9ULB4 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
CDH9Q9ULB4 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
CDH9Q9ULB4 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CDH9Q9ULB4 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CDH9Q9ULB4 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CDH9Q9ULB4 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
CDH9Q9ULB4 MFF-205ENST00000354503 1085 ntTSL 2 BASIC21.63■■□□□ 1.05
CDH9Q9ULB4 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC21.63■■□□□ 1.05
CDH9Q9ULB4 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC21.63■■□□□ 1.05
CDH9Q9ULB4 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
CDH9Q9ULB4 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC21.63■■□□□ 1.05
CDH9Q9ULB4 AC060766.5-201ENST00000590539 871 ntBASIC21.63■■□□□ 1.05
CDH9Q9ULB4 BRWD1-AS2-201ENST00000603064 1028 ntBASIC21.63■■□□□ 1.05
CDH9Q9ULB4 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CDH9Q9ULB4 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms