Protein–RNA interactions for Protein: Q9UHD9

UBQLN2, Ubiquilin-2, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN2Q9UHD9 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
UBQLN2Q9UHD9 MTDHP2-201ENST00000601468 714 ntBASIC17.22■□□□□ 0.35
UBQLN2Q9UHD9 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
UBQLN2Q9UHD9 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
UBQLN2Q9UHD9 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
UBQLN2Q9UHD9 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC17.22■□□□□ 0.35
UBQLN2Q9UHD9 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
UBQLN2Q9UHD9 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
UBQLN2Q9UHD9 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
UBQLN2Q9UHD9 AL162377.1-201ENST00000618844 1793 ntBASIC17.22■□□□□ 0.35
UBQLN2Q9UHD9 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
UBQLN2Q9UHD9 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
UBQLN2Q9UHD9 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC17.21■□□□□ 0.35
UBQLN2Q9UHD9 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
UBQLN2Q9UHD9 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
UBQLN2Q9UHD9 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
UBQLN2Q9UHD9 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
UBQLN2Q9UHD9 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
UBQLN2Q9UHD9 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
UBQLN2Q9UHD9 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC17.21■□□□□ 0.35
UBQLN2Q9UHD9 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
UBQLN2Q9UHD9 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC17.21■□□□□ 0.35
UBQLN2Q9UHD9 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
UBQLN2Q9UHD9 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
UBQLN2Q9UHD9 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC17.21■□□□□ 0.35
UBQLN2Q9UHD9 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
UBQLN2Q9UHD9 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
UBQLN2Q9UHD9 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC17.21■□□□□ 0.34
UBQLN2Q9UHD9 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.34
UBQLN2Q9UHD9 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.34
UBQLN2Q9UHD9 AC093503.3-201ENST00000624917 2352 ntBASIC17.21■□□□□ 0.34
UBQLN2Q9UHD9 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC17.21■□□□□ 0.34
UBQLN2Q9UHD9 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
UBQLN2Q9UHD9 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC17.2■□□□□ 0.34
UBQLN2Q9UHD9 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
UBQLN2Q9UHD9 DET1-207ENST00000564406 2315 ntTSL 2 BASIC17.2■□□□□ 0.34
UBQLN2Q9UHD9 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
UBQLN2Q9UHD9 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
UBQLN2Q9UHD9 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
UBQLN2Q9UHD9 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
UBQLN2Q9UHD9 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC17.2■□□□□ 0.34
UBQLN2Q9UHD9 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
UBQLN2Q9UHD9 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
UBQLN2Q9UHD9 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC17.2■□□□□ 0.34
UBQLN2Q9UHD9 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
UBQLN2Q9UHD9 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC17.2■□□□□ 0.34
UBQLN2Q9UHD9 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC17.2■□□□□ 0.34
UBQLN2Q9UHD9 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC17.2■□□□□ 0.34
UBQLN2Q9UHD9 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
UBQLN2Q9UHD9 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC17.2■□□□□ 0.34
UBQLN2Q9UHD9 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC17.2■□□□□ 0.34
UBQLN2Q9UHD9 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC17.2■□□□□ 0.34
UBQLN2Q9UHD9 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
UBQLN2Q9UHD9 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
UBQLN2Q9UHD9 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
UBQLN2Q9UHD9 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
UBQLN2Q9UHD9 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
UBQLN2Q9UHD9 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC17.2■□□□□ 0.34
UBQLN2Q9UHD9 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
UBQLN2Q9UHD9 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
UBQLN2Q9UHD9 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
UBQLN2Q9UHD9 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC17.19■□□□□ 0.34
UBQLN2Q9UHD9 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
UBQLN2Q9UHD9 ADK-206ENST00000541550 2222 ntTSL 2 BASIC17.19■□□□□ 0.34
UBQLN2Q9UHD9 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
UBQLN2Q9UHD9 AL356441.2-201ENST00000443009 864 ntBASIC17.19■□□□□ 0.34
UBQLN2Q9UHD9 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
UBQLN2Q9UHD9 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC17.19■□□□□ 0.34
UBQLN2Q9UHD9 AC010997.5-201ENST00000609182 354 ntBASIC17.19■□□□□ 0.34
UBQLN2Q9UHD9 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
UBQLN2Q9UHD9 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC17.19■□□□□ 0.34
UBQLN2Q9UHD9 AL512408.1-201ENST00000569378 2000 ntBASIC17.19■□□□□ 0.34
UBQLN2Q9UHD9 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
UBQLN2Q9UHD9 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
UBQLN2Q9UHD9 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC17.19■□□□□ 0.34
UBQLN2Q9UHD9 FZD10-202ENST00000539839 3282 ntBASIC17.19■□□□□ 0.34
UBQLN2Q9UHD9 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
UBQLN2Q9UHD9 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
UBQLN2Q9UHD9 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
UBQLN2Q9UHD9 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
UBQLN2Q9UHD9 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
UBQLN2Q9UHD9 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
UBQLN2Q9UHD9 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
UBQLN2Q9UHD9 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC17.19■□□□□ 0.34
UBQLN2Q9UHD9 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
UBQLN2Q9UHD9 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC17.18■□□□□ 0.34
UBQLN2Q9UHD9 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
UBQLN2Q9UHD9 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC17.18■□□□□ 0.34
UBQLN2Q9UHD9 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
UBQLN2Q9UHD9 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
UBQLN2Q9UHD9 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC17.18■□□□□ 0.34
UBQLN2Q9UHD9 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
UBQLN2Q9UHD9 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
UBQLN2Q9UHD9 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC17.18■□□□□ 0.34
UBQLN2Q9UHD9 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC17.18■□□□□ 0.34
UBQLN2Q9UHD9 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC17.18■□□□□ 0.34
UBQLN2Q9UHD9 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC17.18■□□□□ 0.34
UBQLN2Q9UHD9 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
UBQLN2Q9UHD9 LSM7-203ENST00000585409 512 ntTSL 2 BASIC17.18■□□□□ 0.34
UBQLN2Q9UHD9 SNX5-217ENST00000606557 1087 ntBASIC17.18■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms