Protein–RNA interactions for Protein: Q9NWF4

SLC52A1, Solute carrier family 52, riboflavin transporter, member 1, humanhuman

Predictions only

Length 448 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A1Q9NWF4 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC29.6■■■□□ 2.33
SLC52A1Q9NWF4 RCN1P1-201ENST00000400413 996 ntBASIC29.6■■■□□ 2.33
SLC52A1Q9NWF4 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC29.6■■■□□ 2.33
SLC52A1Q9NWF4 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC29.6■■■□□ 2.33
SLC52A1Q9NWF4 TK2-213ENST00000563369 882 ntTSL 5 BASIC29.6■■■□□ 2.33
SLC52A1Q9NWF4 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC29.6■■■□□ 2.33
SLC52A1Q9NWF4 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC29.6■■■□□ 2.33
SLC52A1Q9NWF4 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC29.6■■■□□ 2.33
SLC52A1Q9NWF4 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC29.59■■■□□ 2.33
SLC52A1Q9NWF4 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
SLC52A1Q9NWF4 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC29.59■■■□□ 2.33
SLC52A1Q9NWF4 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC29.59■■■□□ 2.33
SLC52A1Q9NWF4 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC29.59■■■□□ 2.33
SLC52A1Q9NWF4 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC29.59■■■□□ 2.33
SLC52A1Q9NWF4 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC29.59■■■□□ 2.33
SLC52A1Q9NWF4 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC29.59■■■□□ 2.33
SLC52A1Q9NWF4 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC29.59■■■□□ 2.33
SLC52A1Q9NWF4 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC29.59■■■□□ 2.33
SLC52A1Q9NWF4 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC29.59■■■□□ 2.33
SLC52A1Q9NWF4 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
SLC52A1Q9NWF4 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC29.59■■■□□ 2.33
SLC52A1Q9NWF4 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC29.59■■■□□ 2.33
SLC52A1Q9NWF4 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC29.59■■■□□ 2.33
SLC52A1Q9NWF4 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC29.59■■■□□ 2.33
SLC52A1Q9NWF4 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC29.58■■■□□ 2.33
SLC52A1Q9NWF4 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC29.58■■■□□ 2.33
SLC52A1Q9NWF4 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC29.58■■■□□ 2.33
SLC52A1Q9NWF4 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC29.58■■■□□ 2.33
SLC52A1Q9NWF4 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC29.58■■■□□ 2.33
SLC52A1Q9NWF4 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC29.58■■■□□ 2.33
SLC52A1Q9NWF4 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC29.57■■■□□ 2.32
SLC52A1Q9NWF4 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC29.57■■■□□ 2.32
SLC52A1Q9NWF4 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC29.57■■■□□ 2.32
SLC52A1Q9NWF4 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC29.57■■■□□ 2.32
SLC52A1Q9NWF4 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
SLC52A1Q9NWF4 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC29.57■■■□□ 2.32
SLC52A1Q9NWF4 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC29.57■■■□□ 2.32
SLC52A1Q9NWF4 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC29.57■■■□□ 2.32
SLC52A1Q9NWF4 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC29.57■■■□□ 2.32
SLC52A1Q9NWF4 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
SLC52A1Q9NWF4 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC29.57■■■□□ 2.32
SLC52A1Q9NWF4 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
SLC52A1Q9NWF4 MFF-203ENST00000349901 1716 ntTSL 2 BASIC29.57■■■□□ 2.32
SLC52A1Q9NWF4 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
SLC52A1Q9NWF4 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC29.56■■■□□ 2.32
SLC52A1Q9NWF4 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC29.56■■■□□ 2.32
SLC52A1Q9NWF4 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
SLC52A1Q9NWF4 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC29.56■■■□□ 2.32
SLC52A1Q9NWF4 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
SLC52A1Q9NWF4 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC29.56■■■□□ 2.32
SLC52A1Q9NWF4 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC29.56■■■□□ 2.32
SLC52A1Q9NWF4 PPOX-219ENST00000544598 813 ntTSL 2 BASIC29.56■■■□□ 2.32
SLC52A1Q9NWF4 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC29.56■■■□□ 2.32
SLC52A1Q9NWF4 AL353708.3-201ENST00000610272 989 ntBASIC29.56■■■□□ 2.32
SLC52A1Q9NWF4 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC29.56■■■□□ 2.32
SLC52A1Q9NWF4 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
SLC52A1Q9NWF4 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC29.55■■■□□ 2.32
SLC52A1Q9NWF4 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC29.55■■■□□ 2.32
SLC52A1Q9NWF4 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC29.55■■■□□ 2.32
SLC52A1Q9NWF4 HES2-206ENST00000489730 730 ntTSL 2 BASIC29.55■■■□□ 2.32
SLC52A1Q9NWF4 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC29.55■■■□□ 2.32
SLC52A1Q9NWF4 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC29.55■■■□□ 2.32
SLC52A1Q9NWF4 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC29.55■■■□□ 2.32
SLC52A1Q9NWF4 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC29.54■■■□□ 2.32
SLC52A1Q9NWF4 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC29.54■■■□□ 2.32
SLC52A1Q9NWF4 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
SLC52A1Q9NWF4 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC29.54■■■□□ 2.32
SLC52A1Q9NWF4 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC29.54■■■□□ 2.32
SLC52A1Q9NWF4 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC29.54■■■□□ 2.32
SLC52A1Q9NWF4 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC29.54■■■□□ 2.32
SLC52A1Q9NWF4 AC026471.5-201ENST00000615068 467 ntBASIC29.54■■■□□ 2.32
SLC52A1Q9NWF4 AL121829.2-201ENST00000620908 328 ntBASIC29.54■■■□□ 2.32
SLC52A1Q9NWF4 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC29.54■■■□□ 2.32
SLC52A1Q9NWF4 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC29.54■■■□□ 2.32
SLC52A1Q9NWF4 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC29.54■■■□□ 2.32
SLC52A1Q9NWF4 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC29.53■■■□□ 2.32
SLC52A1Q9NWF4 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
SLC52A1Q9NWF4 SAPCD2P4-201ENST00000424595 1171 ntBASIC29.53■■■□□ 2.32
SLC52A1Q9NWF4 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC29.53■■■□□ 2.32
SLC52A1Q9NWF4 GRAP-204ENST00000573099 846 ntTSL 3 BASIC29.53■■■□□ 2.32
SLC52A1Q9NWF4 GOLGA2P6-201ENST00000340929 2049 ntBASIC29.53■■■□□ 2.32
SLC52A1Q9NWF4 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC29.53■■■□□ 2.32
SLC52A1Q9NWF4 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC29.53■■■□□ 2.32
SLC52A1Q9NWF4 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC29.53■■■□□ 2.32
SLC52A1Q9NWF4 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
SLC52A1Q9NWF4 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
SLC52A1Q9NWF4 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
SLC52A1Q9NWF4 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
SLC52A1Q9NWF4 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC29.52■■■□□ 2.32
SLC52A1Q9NWF4 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
SLC52A1Q9NWF4 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
SLC52A1Q9NWF4 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC29.52■■■□□ 2.32
SLC52A1Q9NWF4 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC29.52■■■□□ 2.32
SLC52A1Q9NWF4 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC29.52■■■□□ 2.32
SLC52A1Q9NWF4 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC29.52■■■□□ 2.32
SLC52A1Q9NWF4 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC29.52■■■□□ 2.32
SLC52A1Q9NWF4 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC29.52■■■□□ 2.32
SLC52A1Q9NWF4 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC29.52■■■□□ 2.32
SLC52A1Q9NWF4 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC29.52■■■□□ 2.32
SLC52A1Q9NWF4 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.32
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms