Protein–RNA interactions for Protein: Q9NQ89

C12orf4, Protein C12orf4, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf4Q9NQ89 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
C12orf4Q9NQ89 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
C12orf4Q9NQ89 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC17.69■□□□□ 0.42
C12orf4Q9NQ89 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
C12orf4Q9NQ89 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC17.68■□□□□ 0.42
C12orf4Q9NQ89 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
C12orf4Q9NQ89 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
C12orf4Q9NQ89 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
C12orf4Q9NQ89 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
C12orf4Q9NQ89 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
C12orf4Q9NQ89 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
C12orf4Q9NQ89 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
C12orf4Q9NQ89 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
C12orf4Q9NQ89 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
C12orf4Q9NQ89 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC17.68■□□□□ 0.42
C12orf4Q9NQ89 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
C12orf4Q9NQ89 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC17.68■□□□□ 0.42
C12orf4Q9NQ89 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC17.68■□□□□ 0.42
C12orf4Q9NQ89 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
C12orf4Q9NQ89 AC090340.1-201ENST00000620778 4980 ntBASIC17.68■□□□□ 0.42
C12orf4Q9NQ89 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
C12orf4Q9NQ89 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC17.68■□□□□ 0.42
C12orf4Q9NQ89 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
C12orf4Q9NQ89 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
C12orf4Q9NQ89 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
C12orf4Q9NQ89 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
C12orf4Q9NQ89 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
C12orf4Q9NQ89 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
C12orf4Q9NQ89 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
C12orf4Q9NQ89 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
C12orf4Q9NQ89 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC17.67■□□□□ 0.42
C12orf4Q9NQ89 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC17.67■□□□□ 0.42
C12orf4Q9NQ89 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC17.67■□□□□ 0.42
C12orf4Q9NQ89 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
C12orf4Q9NQ89 NARF-205ENST00000412079 1760 ntTSL 5 BASIC17.67■□□□□ 0.42
C12orf4Q9NQ89 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC17.67■□□□□ 0.42
C12orf4Q9NQ89 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
C12orf4Q9NQ89 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
C12orf4Q9NQ89 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
C12orf4Q9NQ89 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
C12orf4Q9NQ89 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
C12orf4Q9NQ89 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
C12orf4Q9NQ89 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
C12orf4Q9NQ89 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
C12orf4Q9NQ89 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
C12orf4Q9NQ89 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC17.67■□□□□ 0.42
C12orf4Q9NQ89 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
C12orf4Q9NQ89 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
C12orf4Q9NQ89 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
C12orf4Q9NQ89 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
C12orf4Q9NQ89 PALM-207ENST00000590161 2137 ntTSL 4 BASIC17.66■□□□□ 0.42
C12orf4Q9NQ89 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
C12orf4Q9NQ89 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
C12orf4Q9NQ89 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
C12orf4Q9NQ89 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
C12orf4Q9NQ89 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC17.66■□□□□ 0.42
C12orf4Q9NQ89 PTMA-205ENST00000410064 814 ntTSL 2 BASIC17.66■□□□□ 0.42
C12orf4Q9NQ89 AC131281.2-201ENST00000520478 145 ntBASIC17.66■□□□□ 0.42
C12orf4Q9NQ89 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
C12orf4Q9NQ89 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC17.66■□□□□ 0.42
C12orf4Q9NQ89 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
C12orf4Q9NQ89 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC17.66■□□□□ 0.42
C12orf4Q9NQ89 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
C12orf4Q9NQ89 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
C12orf4Q9NQ89 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC17.66■□□□□ 0.42
C12orf4Q9NQ89 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC17.66■□□□□ 0.42
C12orf4Q9NQ89 FEM1AP1-201ENST00000431297 1995 ntBASIC17.66■□□□□ 0.42
C12orf4Q9NQ89 STX5-203ENST00000394690 1568 ntTSL 5 BASIC17.66■□□□□ 0.42
C12orf4Q9NQ89 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
C12orf4Q9NQ89 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
C12orf4Q9NQ89 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
C12orf4Q9NQ89 LINC01006-201ENST00000333319 2292 ntBASIC17.65■□□□□ 0.42
C12orf4Q9NQ89 AC005082.1-201ENST00000413042 2259 ntBASIC17.65■□□□□ 0.42
C12orf4Q9NQ89 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
C12orf4Q9NQ89 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC17.65■□□□□ 0.42
C12orf4Q9NQ89 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
C12orf4Q9NQ89 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
C12orf4Q9NQ89 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
C12orf4Q9NQ89 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
C12orf4Q9NQ89 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
C12orf4Q9NQ89 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
C12orf4Q9NQ89 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
C12orf4Q9NQ89 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
C12orf4Q9NQ89 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC17.65■□□□□ 0.42
C12orf4Q9NQ89 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
C12orf4Q9NQ89 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC17.65■□□□□ 0.42
C12orf4Q9NQ89 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC17.65■□□□□ 0.42
C12orf4Q9NQ89 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
C12orf4Q9NQ89 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC17.65■□□□□ 0.42
C12orf4Q9NQ89 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC17.65■□□□□ 0.42
C12orf4Q9NQ89 SMUG1P1-201ENST00000590640 811 ntBASIC17.65■□□□□ 0.42
C12orf4Q9NQ89 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC17.65■□□□□ 0.42
C12orf4Q9NQ89 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
C12orf4Q9NQ89 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
C12orf4Q9NQ89 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC17.65■□□□□ 0.42
C12orf4Q9NQ89 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
C12orf4Q9NQ89 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC17.65■□□□□ 0.42
C12orf4Q9NQ89 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.42
C12orf4Q9NQ89 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC17.64■□□□□ 0.42
C12orf4Q9NQ89 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms