Protein–RNA interactions for Protein: Q9HAH1

ZNF556, Zinc finger protein 556, humanhuman

Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF556Q9HAH1 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ZNF556Q9HAH1 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
ZNF556Q9HAH1 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
ZNF556Q9HAH1 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ZNF556Q9HAH1 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC18.91■□□□□ 0.62
ZNF556Q9HAH1 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC18.91■□□□□ 0.62
ZNF556Q9HAH1 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ZNF556Q9HAH1 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC18.91■□□□□ 0.62
ZNF556Q9HAH1 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ZNF556Q9HAH1 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC18.91■□□□□ 0.62
ZNF556Q9HAH1 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ZNF556Q9HAH1 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC18.91■□□□□ 0.62
ZNF556Q9HAH1 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ZNF556Q9HAH1 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
ZNF556Q9HAH1 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
ZNF556Q9HAH1 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC18.9■□□□□ 0.62
ZNF556Q9HAH1 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC18.9■□□□□ 0.62
ZNF556Q9HAH1 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
ZNF556Q9HAH1 BX005040.4-201ENST00000637145 1518 ntBASIC18.9■□□□□ 0.62
ZNF556Q9HAH1 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ZNF556Q9HAH1 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ZNF556Q9HAH1 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ZNF556Q9HAH1 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
ZNF556Q9HAH1 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC18.9■□□□□ 0.62
ZNF556Q9HAH1 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
ZNF556Q9HAH1 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC18.9■□□□□ 0.62
ZNF556Q9HAH1 BX842568.3-201ENST00000418104 571 ntBASIC18.9■□□□□ 0.62
ZNF556Q9HAH1 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC18.9■□□□□ 0.62
ZNF556Q9HAH1 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
ZNF556Q9HAH1 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
ZNF556Q9HAH1 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
ZNF556Q9HAH1 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
ZNF556Q9HAH1 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
ZNF556Q9HAH1 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
ZNF556Q9HAH1 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC18.9■□□□□ 0.62
ZNF556Q9HAH1 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
ZNF556Q9HAH1 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC18.9■□□□□ 0.62
ZNF556Q9HAH1 EXOC3-AS1-202ENST00000623673 1663 ntBASIC18.89■□□□□ 0.61
ZNF556Q9HAH1 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ZNF556Q9HAH1 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
ZNF556Q9HAH1 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC18.89■□□□□ 0.61
ZNF556Q9HAH1 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ZNF556Q9HAH1 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ZNF556Q9HAH1 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ZNF556Q9HAH1 PTMA-205ENST00000410064 814 ntTSL 2 BASIC18.89■□□□□ 0.61
ZNF556Q9HAH1 RNF146-206ENST00000480444 843 ntTSL 2 BASIC18.89■□□□□ 0.61
ZNF556Q9HAH1 TRIR-202ENST00000588213 841 ntTSL 3 BASIC18.89■□□□□ 0.61
ZNF556Q9HAH1 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
ZNF556Q9HAH1 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ZNF556Q9HAH1 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
ZNF556Q9HAH1 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
ZNF556Q9HAH1 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC18.89■□□□□ 0.61
ZNF556Q9HAH1 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ZNF556Q9HAH1 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.61
ZNF556Q9HAH1 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ZNF556Q9HAH1 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ZNF556Q9HAH1 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC18.89■□□□□ 0.61
ZNF556Q9HAH1 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
ZNF556Q9HAH1 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ZNF556Q9HAH1 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
ZNF556Q9HAH1 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC18.88■□□□□ 0.61
ZNF556Q9HAH1 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ZNF556Q9HAH1 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
ZNF556Q9HAH1 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
ZNF556Q9HAH1 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
ZNF556Q9HAH1 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC18.88■□□□□ 0.61
ZNF556Q9HAH1 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
ZNF556Q9HAH1 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC18.88■□□□□ 0.61
ZNF556Q9HAH1 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC18.88■□□□□ 0.61
ZNF556Q9HAH1 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
ZNF556Q9HAH1 AC133561.4-201ENST00000566112 224 ntBASIC18.88■□□□□ 0.61
ZNF556Q9HAH1 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC18.88■□□□□ 0.61
ZNF556Q9HAH1 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ZNF556Q9HAH1 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
ZNF556Q9HAH1 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
ZNF556Q9HAH1 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC18.88■□□□□ 0.61
ZNF556Q9HAH1 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
ZNF556Q9HAH1 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ZNF556Q9HAH1 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
ZNF556Q9HAH1 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
ZNF556Q9HAH1 AC092720.2-201ENST00000602388 1665 ntBASIC18.88■□□□□ 0.61
ZNF556Q9HAH1 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
ZNF556Q9HAH1 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
ZNF556Q9HAH1 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
ZNF556Q9HAH1 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
ZNF556Q9HAH1 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ZNF556Q9HAH1 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ZNF556Q9HAH1 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
ZNF556Q9HAH1 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
ZNF556Q9HAH1 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC18.87■□□□□ 0.61
ZNF556Q9HAH1 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ZNF556Q9HAH1 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC18.87■□□□□ 0.61
ZNF556Q9HAH1 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
ZNF556Q9HAH1 AC126544.1-201ENST00000580842 1059 ntBASIC18.87■□□□□ 0.61
ZNF556Q9HAH1 MIR4466-201ENST00000606121 54 ntBASIC18.87■□□□□ 0.61
ZNF556Q9HAH1 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC18.87■□□□□ 0.61
ZNF556Q9HAH1 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC18.87■□□□□ 0.61
ZNF556Q9HAH1 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC18.87■□□□□ 0.61
ZNF556Q9HAH1 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC18.87■□□□□ 0.61
ZNF556Q9HAH1 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms