Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
LRRC40Q9H9A6 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC20.77■□□□□ 0.92
LRRC40Q9H9A6 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
LRRC40Q9H9A6 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC20.77■□□□□ 0.92
LRRC40Q9H9A6 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
LRRC40Q9H9A6 STX7-201ENST00000367937 1090 ntTSL 5 BASIC20.77■□□□□ 0.92
LRRC40Q9H9A6 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC20.77■□□□□ 0.92
LRRC40Q9H9A6 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
LRRC40Q9H9A6 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
LRRC40Q9H9A6 KRT18P5-201ENST00000436075 1291 ntBASIC20.77■□□□□ 0.92
LRRC40Q9H9A6 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
LRRC40Q9H9A6 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC20.77■□□□□ 0.92
LRRC40Q9H9A6 RARRES2P6-201ENST00000567333 442 ntBASIC20.77■□□□□ 0.92
LRRC40Q9H9A6 MIR2861-201ENST00000636310 90 ntBASIC20.77■□□□□ 0.92
LRRC40Q9H9A6 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
LRRC40Q9H9A6 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
LRRC40Q9H9A6 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
LRRC40Q9H9A6 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
LRRC40Q9H9A6 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC20.77■□□□□ 0.92
LRRC40Q9H9A6 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.91
LRRC40Q9H9A6 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC20.77■□□□□ 0.91
LRRC40Q9H9A6 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC20.77■□□□□ 0.91
LRRC40Q9H9A6 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
LRRC40Q9H9A6 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
LRRC40Q9H9A6 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
LRRC40Q9H9A6 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
LRRC40Q9H9A6 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
LRRC40Q9H9A6 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
LRRC40Q9H9A6 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC20.76■□□□□ 0.91
LRRC40Q9H9A6 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
LRRC40Q9H9A6 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
LRRC40Q9H9A6 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC20.76■□□□□ 0.91
LRRC40Q9H9A6 SAPCD2P1-201ENST00000395413 1184 ntBASIC20.76■□□□□ 0.91
LRRC40Q9H9A6 CDV3P1-201ENST00000471403 739 ntBASIC20.76■□□□□ 0.91
LRRC40Q9H9A6 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC20.76■□□□□ 0.91
LRRC40Q9H9A6 BRI3-207ENST00000539286 699 ntTSL 2 BASIC20.76■□□□□ 0.91
LRRC40Q9H9A6 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC20.76■□□□□ 0.91
LRRC40Q9H9A6 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC20.76■□□□□ 0.91
LRRC40Q9H9A6 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
LRRC40Q9H9A6 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
LRRC40Q9H9A6 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
LRRC40Q9H9A6 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
LRRC40Q9H9A6 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC20.76■□□□□ 0.91
LRRC40Q9H9A6 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC20.76■□□□□ 0.91
LRRC40Q9H9A6 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
LRRC40Q9H9A6 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
LRRC40Q9H9A6 AL121603.2-201ENST00000557373 2117 ntBASIC20.75■□□□□ 0.91
LRRC40Q9H9A6 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC20.75■□□□□ 0.91
LRRC40Q9H9A6 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC20.75■□□□□ 0.91
LRRC40Q9H9A6 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC20.75■□□□□ 0.91
LRRC40Q9H9A6 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
LRRC40Q9H9A6 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
LRRC40Q9H9A6 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
LRRC40Q9H9A6 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
LRRC40Q9H9A6 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC20.75■□□□□ 0.91
LRRC40Q9H9A6 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
LRRC40Q9H9A6 AC137761.2-201ENST00000561729 223 ntBASIC20.75■□□□□ 0.91
LRRC40Q9H9A6 AC145350.3-201ENST00000569033 163 ntBASIC20.75■□□□□ 0.91
LRRC40Q9H9A6 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
LRRC40Q9H9A6 AC010536.3-201ENST00000620306 533 ntBASIC20.75■□□□□ 0.91
LRRC40Q9H9A6 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
LRRC40Q9H9A6 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC20.75■□□□□ 0.91
LRRC40Q9H9A6 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
LRRC40Q9H9A6 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
LRRC40Q9H9A6 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
LRRC40Q9H9A6 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
LRRC40Q9H9A6 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
LRRC40Q9H9A6 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
LRRC40Q9H9A6 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
LRRC40Q9H9A6 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC20.74■□□□□ 0.91
LRRC40Q9H9A6 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
LRRC40Q9H9A6 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
LRRC40Q9H9A6 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
LRRC40Q9H9A6 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC20.74■□□□□ 0.91
LRRC40Q9H9A6 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC20.74■□□□□ 0.91
LRRC40Q9H9A6 GXYLT1P2-201ENST00000433312 1230 ntBASIC20.74■□□□□ 0.91
LRRC40Q9H9A6 TERF1P5-201ENST00000477545 1207 ntBASIC20.74■□□□□ 0.91
LRRC40Q9H9A6 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC20.74■□□□□ 0.91
LRRC40Q9H9A6 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
LRRC40Q9H9A6 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC20.74■□□□□ 0.91
LRRC40Q9H9A6 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
LRRC40Q9H9A6 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
LRRC40Q9H9A6 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
LRRC40Q9H9A6 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
LRRC40Q9H9A6 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC20.74■□□□□ 0.91
LRRC40Q9H9A6 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
LRRC40Q9H9A6 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
LRRC40Q9H9A6 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC20.74■□□□□ 0.91
LRRC40Q9H9A6 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
LRRC40Q9H9A6 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
LRRC40Q9H9A6 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
LRRC40Q9H9A6 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
LRRC40Q9H9A6 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
LRRC40Q9H9A6 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC20.73■□□□□ 0.91
LRRC40Q9H9A6 HSCB-202ENST00000398941 955 ntTSL 2 BASIC20.73■□□□□ 0.91
LRRC40Q9H9A6 SPI1-203ENST00000533030 661 ntTSL 2 BASIC20.73■□□□□ 0.91
LRRC40Q9H9A6 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC20.73■□□□□ 0.91
LRRC40Q9H9A6 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
LRRC40Q9H9A6 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC20.73■□□□□ 0.91
LRRC40Q9H9A6 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC20.73■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms