Protein–RNA interactions for Protein: Q9H611

PIF1, ATP-dependent DNA helicase PIF1, humanhuman

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIF1Q9H611 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC19.49■□□□□ 0.71
PIF1Q9H611 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PIF1Q9H611 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC19.49■□□□□ 0.71
PIF1Q9H611 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC19.49■□□□□ 0.71
PIF1Q9H611 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
PIF1Q9H611 GRAMD4P4-201ENST00000613563 1115 ntBASIC19.49■□□□□ 0.71
PIF1Q9H611 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC19.49■□□□□ 0.71
PIF1Q9H611 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
PIF1Q9H611 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC19.49■□□□□ 0.71
PIF1Q9H611 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC19.49■□□□□ 0.71
PIF1Q9H611 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PIF1Q9H611 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
PIF1Q9H611 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PIF1Q9H611 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
PIF1Q9H611 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC19.49■□□□□ 0.71
PIF1Q9H611 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC19.49■□□□□ 0.71
PIF1Q9H611 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC19.48■□□□□ 0.71
PIF1Q9H611 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
PIF1Q9H611 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PIF1Q9H611 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PIF1Q9H611 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC19.48■□□□□ 0.71
PIF1Q9H611 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC19.48■□□□□ 0.71
PIF1Q9H611 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PIF1Q9H611 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PIF1Q9H611 FXN-202ENST00000396364 980 ntTSL 5 BASIC19.48■□□□□ 0.71
PIF1Q9H611 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
PIF1Q9H611 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC19.48■□□□□ 0.71
PIF1Q9H611 RNF146-206ENST00000480444 843 ntTSL 2 BASIC19.48■□□□□ 0.71
PIF1Q9H611 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PIF1Q9H611 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PIF1Q9H611 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC19.48■□□□□ 0.71
PIF1Q9H611 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
PIF1Q9H611 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC19.48■□□□□ 0.71
PIF1Q9H611 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PIF1Q9H611 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PIF1Q9H611 EXOC3-AS1-202ENST00000623673 1663 ntBASIC19.48■□□□□ 0.71
PIF1Q9H611 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
PIF1Q9H611 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PIF1Q9H611 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PIF1Q9H611 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
PIF1Q9H611 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
PIF1Q9H611 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
PIF1Q9H611 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PIF1Q9H611 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
PIF1Q9H611 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PIF1Q9H611 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PIF1Q9H611 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PIF1Q9H611 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC19.47■□□□□ 0.71
PIF1Q9H611 RASA4CP-201ENST00000424092 1398 ntBASIC19.47■□□□□ 0.71
PIF1Q9H611 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PIF1Q9H611 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PIF1Q9H611 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PIF1Q9H611 MIR939-201ENST00000401314 82 ntBASIC19.47■□□□□ 0.71
PIF1Q9H611 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC19.47■□□□□ 0.71
PIF1Q9H611 AC091305.1-201ENST00000479476 895 ntBASIC19.47■□□□□ 0.71
PIF1Q9H611 SUDS3P1-201ENST00000505831 966 ntBASIC19.47■□□□□ 0.71
PIF1Q9H611 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
PIF1Q9H611 AL031432.3-201ENST00000607698 485 ntBASIC19.47■□□□□ 0.71
PIF1Q9H611 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PIF1Q9H611 AIRN-201ENST00000601203 4374 ntBASIC19.47■□□□□ 0.71
PIF1Q9H611 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC19.47■□□□□ 0.71
PIF1Q9H611 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PIF1Q9H611 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PIF1Q9H611 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC19.47■□□□□ 0.71
PIF1Q9H611 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC19.47■□□□□ 0.71
PIF1Q9H611 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
PIF1Q9H611 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PIF1Q9H611 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PIF1Q9H611 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PIF1Q9H611 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PIF1Q9H611 AC061975.6-201ENST00000579045 1553 ntBASIC19.46■□□□□ 0.71
PIF1Q9H611 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PIF1Q9H611 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PIF1Q9H611 AP001330.3-201ENST00000520123 633 ntBASIC19.46■□□□□ 0.71
PIF1Q9H611 AICDA-202ENST00000537228 667 ntTSL 5 BASIC19.46■□□□□ 0.71
PIF1Q9H611 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PIF1Q9H611 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PIF1Q9H611 TSPY26P-201ENST00000476365 1326 ntBASIC19.46■□□□□ 0.71
PIF1Q9H611 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PIF1Q9H611 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC19.46■□□□□ 0.71
PIF1Q9H611 AC138932.1-201ENST00000534164 6830 ntBASIC19.45■□□□□ 0.7
PIF1Q9H611 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
PIF1Q9H611 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PIF1Q9H611 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC19.45■□□□□ 0.7
PIF1Q9H611 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
PIF1Q9H611 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PIF1Q9H611 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC19.45■□□□□ 0.7
PIF1Q9H611 AC011484.1-201ENST00000377652 1995 ntBASIC19.45■□□□□ 0.7
PIF1Q9H611 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC19.45■□□□□ 0.7
PIF1Q9H611 LHPP-203ENST00000392757 840 ntTSL 3 BASIC19.45■□□□□ 0.7
PIF1Q9H611 AC005837.3-201ENST00000612163 286 ntBASIC19.45■□□□□ 0.7
PIF1Q9H611 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC19.45■□□□□ 0.7
PIF1Q9H611 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PIF1Q9H611 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC19.45■□□□□ 0.7
PIF1Q9H611 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC19.45■□□□□ 0.7
PIF1Q9H611 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PIF1Q9H611 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PIF1Q9H611 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
PIF1Q9H611 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PIF1Q9H611 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms