Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
VPS11Q9H270 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
VPS11Q9H270 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
VPS11Q9H270 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
VPS11Q9H270 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC20.55■□□□□ 0.88
VPS11Q9H270 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC20.55■□□□□ 0.88
VPS11Q9H270 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC20.55■□□□□ 0.88
VPS11Q9H270 AC091305.1-201ENST00000479476 895 ntBASIC20.55■□□□□ 0.88
VPS11Q9H270 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC20.55■□□□□ 0.88
VPS11Q9H270 AC110285.6-201ENST00000617652 491 ntBASIC20.55■□□□□ 0.88
VPS11Q9H270 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC20.55■□□□□ 0.88
VPS11Q9H270 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
VPS11Q9H270 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
VPS11Q9H270 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
VPS11Q9H270 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC20.55■□□□□ 0.88
VPS11Q9H270 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC20.55■□□□□ 0.88
VPS11Q9H270 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
VPS11Q9H270 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
VPS11Q9H270 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
VPS11Q9H270 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
VPS11Q9H270 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
VPS11Q9H270 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
VPS11Q9H270 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC20.54■□□□□ 0.88
VPS11Q9H270 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
VPS11Q9H270 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
VPS11Q9H270 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
VPS11Q9H270 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
VPS11Q9H270 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC20.54■□□□□ 0.88
VPS11Q9H270 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC20.54■□□□□ 0.88
VPS11Q9H270 AC012414.1-201ENST00000556676 535 ntBASIC20.54■□□□□ 0.88
VPS11Q9H270 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
VPS11Q9H270 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC20.54■□□□□ 0.88
VPS11Q9H270 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC20.54■□□□□ 0.88
VPS11Q9H270 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
VPS11Q9H270 AC011484.1-201ENST00000377652 1995 ntBASIC20.54■□□□□ 0.88
VPS11Q9H270 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
VPS11Q9H270 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
VPS11Q9H270 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
VPS11Q9H270 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
VPS11Q9H270 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
VPS11Q9H270 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
VPS11Q9H270 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
VPS11Q9H270 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
VPS11Q9H270 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
VPS11Q9H270 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
VPS11Q9H270 AL136967.2-201ENST00000623968 743 ntBASIC20.53■□□□□ 0.88
VPS11Q9H270 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
VPS11Q9H270 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
VPS11Q9H270 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
VPS11Q9H270 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
VPS11Q9H270 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
VPS11Q9H270 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
VPS11Q9H270 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
VPS11Q9H270 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
VPS11Q9H270 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
VPS11Q9H270 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
VPS11Q9H270 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
VPS11Q9H270 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC20.52■□□□□ 0.88
VPS11Q9H270 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
VPS11Q9H270 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC20.52■□□□□ 0.88
VPS11Q9H270 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
VPS11Q9H270 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC20.52■□□□□ 0.88
VPS11Q9H270 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
VPS11Q9H270 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
VPS11Q9H270 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
VPS11Q9H270 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
VPS11Q9H270 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
VPS11Q9H270 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
VPS11Q9H270 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
VPS11Q9H270 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
VPS11Q9H270 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
VPS11Q9H270 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
VPS11Q9H270 SMG8-203ENST00000578922 2178 ntBASIC20.51■□□□□ 0.87
VPS11Q9H270 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC20.51■□□□□ 0.87
VPS11Q9H270 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC20.51■□□□□ 0.87
VPS11Q9H270 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC20.51■□□□□ 0.87
VPS11Q9H270 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC20.51■□□□□ 0.87
VPS11Q9H270 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC20.51■□□□□ 0.87
VPS11Q9H270 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
VPS11Q9H270 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
VPS11Q9H270 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
VPS11Q9H270 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC20.51■□□□□ 0.87
VPS11Q9H270 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC20.51■□□□□ 0.87
VPS11Q9H270 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
VPS11Q9H270 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
VPS11Q9H270 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
VPS11Q9H270 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
VPS11Q9H270 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
VPS11Q9H270 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
VPS11Q9H270 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
VPS11Q9H270 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
VPS11Q9H270 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
VPS11Q9H270 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC20.5■□□□□ 0.87
VPS11Q9H270 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
VPS11Q9H270 NT5C3AP1-201ENST00000394500 1012 ntBASIC20.5■□□□□ 0.87
VPS11Q9H270 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC20.5■□□□□ 0.87
VPS11Q9H270 NALT1-201ENST00000429224 738 ntTSL 5 BASIC20.5■□□□□ 0.87
VPS11Q9H270 AL031432.3-201ENST00000607698 485 ntBASIC20.5■□□□□ 0.87
VPS11Q9H270 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC20.5■□□□□ 0.87
VPS11Q9H270 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms