Protein–RNA interactions for Protein: Q9C0D0

PHACTR1, Phosphatase and actin regulator 1, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR1Q9C0D0 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC20.75■□□□□ 0.91
PHACTR1Q9C0D0 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
PHACTR1Q9C0D0 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
PHACTR1Q9C0D0 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
PHACTR1Q9C0D0 AL031432.3-201ENST00000607698 485 ntBASIC20.75■□□□□ 0.91
PHACTR1Q9C0D0 AC110285.6-201ENST00000617652 491 ntBASIC20.75■□□□□ 0.91
PHACTR1Q9C0D0 AC120498.10-201ENST00000621827 505 ntBASIC20.75■□□□□ 0.91
PHACTR1Q9C0D0 AL136967.2-201ENST00000623968 743 ntBASIC20.75■□□□□ 0.91
PHACTR1Q9C0D0 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC20.75■□□□□ 0.91
PHACTR1Q9C0D0 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC20.75■□□□□ 0.91
PHACTR1Q9C0D0 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC20.75■□□□□ 0.91
PHACTR1Q9C0D0 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC20.75■□□□□ 0.91
PHACTR1Q9C0D0 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PHACTR1Q9C0D0 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
PHACTR1Q9C0D0 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC20.74■□□□□ 0.91
PHACTR1Q9C0D0 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC20.74■□□□□ 0.91
PHACTR1Q9C0D0 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC20.74■□□□□ 0.91
PHACTR1Q9C0D0 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PHACTR1Q9C0D0 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PHACTR1Q9C0D0 NT5C3AP1-201ENST00000394500 1012 ntBASIC20.74■□□□□ 0.91
PHACTR1Q9C0D0 MTURN-203ENST00000409688 843 ntTSL 2 BASIC20.74■□□□□ 0.91
PHACTR1Q9C0D0 PTPA-214ENST00000423100 988 ntTSL 2 BASIC20.74■□□□□ 0.91
PHACTR1Q9C0D0 AC010141.2-201ENST00000452426 721 ntBASIC20.74■□□□□ 0.91
PHACTR1Q9C0D0 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
PHACTR1Q9C0D0 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC20.74■□□□□ 0.91
PHACTR1Q9C0D0 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC20.74■□□□□ 0.91
PHACTR1Q9C0D0 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PHACTR1Q9C0D0 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PHACTR1Q9C0D0 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PHACTR1Q9C0D0 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC20.73■□□□□ 0.91
PHACTR1Q9C0D0 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
PHACTR1Q9C0D0 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
PHACTR1Q9C0D0 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
PHACTR1Q9C0D0 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PHACTR1Q9C0D0 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC20.73■□□□□ 0.91
PHACTR1Q9C0D0 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
PHACTR1Q9C0D0 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC20.73■□□□□ 0.91
PHACTR1Q9C0D0 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
PHACTR1Q9C0D0 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC20.73■□□□□ 0.91
PHACTR1Q9C0D0 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PHACTR1Q9C0D0 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC20.73■□□□□ 0.91
PHACTR1Q9C0D0 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
PHACTR1Q9C0D0 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC20.73■□□□□ 0.91
PHACTR1Q9C0D0 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC20.73■□□□□ 0.91
PHACTR1Q9C0D0 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
PHACTR1Q9C0D0 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC20.73■□□□□ 0.91
PHACTR1Q9C0D0 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
PHACTR1Q9C0D0 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
PHACTR1Q9C0D0 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
PHACTR1Q9C0D0 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC20.72■□□□□ 0.91
PHACTR1Q9C0D0 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC20.72■□□□□ 0.91
PHACTR1Q9C0D0 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PHACTR1Q9C0D0 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
PHACTR1Q9C0D0 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
PHACTR1Q9C0D0 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC20.72■□□□□ 0.91
PHACTR1Q9C0D0 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC20.72■□□□□ 0.91
PHACTR1Q9C0D0 SERP1-208ENST00000491660 830 ntTSL 2 BASIC20.72■□□□□ 0.91
PHACTR1Q9C0D0 RALB-208ENST00000631312 311 ntTSL 5 BASIC20.72■□□□□ 0.91
PHACTR1Q9C0D0 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
PHACTR1Q9C0D0 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
PHACTR1Q9C0D0 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
PHACTR1Q9C0D0 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC20.72■□□□□ 0.91
PHACTR1Q9C0D0 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
PHACTR1Q9C0D0 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
PHACTR1Q9C0D0 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PHACTR1Q9C0D0 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
PHACTR1Q9C0D0 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
PHACTR1Q9C0D0 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
PHACTR1Q9C0D0 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PHACTR1Q9C0D0 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PHACTR1Q9C0D0 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PHACTR1Q9C0D0 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
PHACTR1Q9C0D0 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
PHACTR1Q9C0D0 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC20.71■□□□□ 0.91
PHACTR1Q9C0D0 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PHACTR1Q9C0D0 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PHACTR1Q9C0D0 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
PHACTR1Q9C0D0 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
PHACTR1Q9C0D0 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC20.71■□□□□ 0.91
PHACTR1Q9C0D0 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
PHACTR1Q9C0D0 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC20.7■□□□□ 0.9
PHACTR1Q9C0D0 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PHACTR1Q9C0D0 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
PHACTR1Q9C0D0 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC20.7■□□□□ 0.9
PHACTR1Q9C0D0 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
PHACTR1Q9C0D0 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
PHACTR1Q9C0D0 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC20.7■□□□□ 0.9
PHACTR1Q9C0D0 AL139246.5-201ENST00000606645 996 ntBASIC20.7■□□□□ 0.9
PHACTR1Q9C0D0 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PHACTR1Q9C0D0 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC20.7■□□□□ 0.9
PHACTR1Q9C0D0 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC20.7■□□□□ 0.9
PHACTR1Q9C0D0 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
PHACTR1Q9C0D0 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
PHACTR1Q9C0D0 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PHACTR1Q9C0D0 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC20.7■□□□□ 0.9
PHACTR1Q9C0D0 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PHACTR1Q9C0D0 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PHACTR1Q9C0D0 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PHACTR1Q9C0D0 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PHACTR1Q9C0D0 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms