Protein–RNA interactions for Protein: Q9C056

NKX6-2, Homeobox protein Nkx-6.2, humanhuman

Predicted RBP Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-2Q9C056 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NKX6-2Q9C056 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
NKX6-2Q9C056 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NKX6-2Q9C056 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
NKX6-2Q9C056 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
NKX6-2Q9C056 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
NKX6-2Q9C056 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC16.54■□□□□ 0.24
NKX6-2Q9C056 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC16.54■□□□□ 0.24
NKX6-2Q9C056 IDNK-201ENST00000376417 511 ntTSL 5 BASIC16.54■□□□□ 0.24
NKX6-2Q9C056 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NKX6-2Q9C056 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC16.54■□□□□ 0.24
NKX6-2Q9C056 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC16.54■□□□□ 0.24
NKX6-2Q9C056 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC16.54■□□□□ 0.24
NKX6-2Q9C056 AC074183.2-201ENST00000623112 922 ntBASIC16.54■□□□□ 0.24
NKX6-2Q9C056 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NKX6-2Q9C056 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NKX6-2Q9C056 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC16.54■□□□□ 0.24
NKX6-2Q9C056 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NKX6-2Q9C056 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC16.54■□□□□ 0.24
NKX6-2Q9C056 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC16.53■□□□□ 0.24
NKX6-2Q9C056 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NKX6-2Q9C056 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC16.53■□□□□ 0.24
NKX6-2Q9C056 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NKX6-2Q9C056 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC16.53■□□□□ 0.24
NKX6-2Q9C056 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
NKX6-2Q9C056 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC16.53■□□□□ 0.24
NKX6-2Q9C056 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
NKX6-2Q9C056 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NKX6-2Q9C056 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NKX6-2Q9C056 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NKX6-2Q9C056 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC16.53■□□□□ 0.24
NKX6-2Q9C056 PARN-205ENST00000539279 1557 ntTSL 2 BASIC16.53■□□□□ 0.24
NKX6-2Q9C056 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NKX6-2Q9C056 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
NKX6-2Q9C056 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC16.53■□□□□ 0.24
NKX6-2Q9C056 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
NKX6-2Q9C056 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
NKX6-2Q9C056 DET1-207ENST00000564406 2315 ntTSL 2 BASIC16.53■□□□□ 0.24
NKX6-2Q9C056 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC16.53■□□□□ 0.24
NKX6-2Q9C056 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC16.53■□□□□ 0.24
NKX6-2Q9C056 AL512408.1-201ENST00000569378 2000 ntBASIC16.53■□□□□ 0.24
NKX6-2Q9C056 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
NKX6-2Q9C056 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NKX6-2Q9C056 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC16.53■□□□□ 0.24
NKX6-2Q9C056 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC16.53■□□□□ 0.24
NKX6-2Q9C056 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC16.52■□□□□ 0.24
NKX6-2Q9C056 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC16.52■□□□□ 0.24
NKX6-2Q9C056 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
NKX6-2Q9C056 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
NKX6-2Q9C056 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC16.52■□□□□ 0.24
NKX6-2Q9C056 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
NKX6-2Q9C056 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
NKX6-2Q9C056 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
NKX6-2Q9C056 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
NKX6-2Q9C056 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
NKX6-2Q9C056 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.23
NKX6-2Q9C056 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC16.52■□□□□ 0.23
NKX6-2Q9C056 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
NKX6-2Q9C056 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC16.52■□□□□ 0.23
NKX6-2Q9C056 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.23
NKX6-2Q9C056 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC16.52■□□□□ 0.23
NKX6-2Q9C056 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
NKX6-2Q9C056 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
NKX6-2Q9C056 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
NKX6-2Q9C056 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC16.52■□□□□ 0.23
NKX6-2Q9C056 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
NKX6-2Q9C056 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC16.52■□□□□ 0.23
NKX6-2Q9C056 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
NKX6-2Q9C056 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
NKX6-2Q9C056 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
NKX6-2Q9C056 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
NKX6-2Q9C056 C17orf82-201ENST00000623772 1530 ntBASIC16.51■□□□□ 0.23
NKX6-2Q9C056 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
NKX6-2Q9C056 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
NKX6-2Q9C056 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
NKX6-2Q9C056 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC16.51■□□□□ 0.23
NKX6-2Q9C056 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NKX6-2Q9C056 ASB1-202ENST00000409297 878 ntTSL 5 BASIC16.51■□□□□ 0.23
NKX6-2Q9C056 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
NKX6-2Q9C056 AC005332.7-201ENST00000614046 2005 ntBASIC16.51■□□□□ 0.23
NKX6-2Q9C056 AC004687.1-201ENST00000579003 1625 ntBASIC16.51■□□□□ 0.23
NKX6-2Q9C056 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
NKX6-2Q9C056 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NKX6-2Q9C056 HCG11-201ENST00000411553 5696 ntBASIC16.51■□□□□ 0.23
NKX6-2Q9C056 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
NKX6-2Q9C056 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
NKX6-2Q9C056 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC16.5■□□□□ 0.23
NKX6-2Q9C056 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
NKX6-2Q9C056 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
NKX6-2Q9C056 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
NKX6-2Q9C056 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
NKX6-2Q9C056 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
NKX6-2Q9C056 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
NKX6-2Q9C056 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
NKX6-2Q9C056 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
NKX6-2Q9C056 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
NKX6-2Q9C056 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC16.5■□□□□ 0.23
NKX6-2Q9C056 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC16.5■□□□□ 0.23
NKX6-2Q9C056 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
NKX6-2Q9C056 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC16.5■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms