Protein–RNA interactions for Protein: Q9C040

TRIM2, Tripartite motif-containing protein 2, humanhuman

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM2Q9C040 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC18.8■□□□□ 0.6
TRIM2Q9C040 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TRIM2Q9C040 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
TRIM2Q9C040 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
TRIM2Q9C040 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TRIM2Q9C040 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRIM2Q9C040 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRIM2Q9C040 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC18.79■□□□□ 0.6
TRIM2Q9C040 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRIM2Q9C040 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRIM2Q9C040 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRIM2Q9C040 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC18.79■□□□□ 0.6
TRIM2Q9C040 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRIM2Q9C040 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRIM2Q9C040 AC020907.5-201ENST00000624372 1936 ntBASIC18.79■□□□□ 0.6
TRIM2Q9C040 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRIM2Q9C040 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRIM2Q9C040 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC18.79■□□□□ 0.6
TRIM2Q9C040 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC18.79■□□□□ 0.6
TRIM2Q9C040 AC243732.1-201ENST00000612648 864 ntBASIC18.79■□□□□ 0.6
TRIM2Q9C040 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC18.79■□□□□ 0.6
TRIM2Q9C040 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TRIM2Q9C040 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRIM2Q9C040 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
TRIM2Q9C040 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
TRIM2Q9C040 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC18.79■□□□□ 0.6
TRIM2Q9C040 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TRIM2Q9C040 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC18.79■□□□□ 0.6
TRIM2Q9C040 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TRIM2Q9C040 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC18.79■□□□□ 0.6
TRIM2Q9C040 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
TRIM2Q9C040 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
TRIM2Q9C040 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC18.78■□□□□ 0.6
TRIM2Q9C040 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TRIM2Q9C040 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRIM2Q9C040 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC18.78■□□□□ 0.6
TRIM2Q9C040 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC18.78■□□□□ 0.6
TRIM2Q9C040 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC18.78■□□□□ 0.6
TRIM2Q9C040 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC18.78■□□□□ 0.6
TRIM2Q9C040 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TRIM2Q9C040 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC18.78■□□□□ 0.6
TRIM2Q9C040 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRIM2Q9C040 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRIM2Q9C040 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRIM2Q9C040 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC18.78■□□□□ 0.6
TRIM2Q9C040 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TRIM2Q9C040 AC092667.1-201ENST00000434301 2586 ntBASIC18.78■□□□□ 0.6
TRIM2Q9C040 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC18.77■□□□□ 0.6
TRIM2Q9C040 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC18.77■□□□□ 0.6
TRIM2Q9C040 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
TRIM2Q9C040 AC073130.3-201ENST00000624389 2278 ntBASIC18.77■□□□□ 0.6
TRIM2Q9C040 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRIM2Q9C040 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
TRIM2Q9C040 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC18.77■□□□□ 0.6
TRIM2Q9C040 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
TRIM2Q9C040 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
TRIM2Q9C040 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC18.77■□□□□ 0.6
TRIM2Q9C040 MED17-221ENST00000639724 2317 ntTSL 5 BASIC18.77■□□□□ 0.6
TRIM2Q9C040 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC18.77■□□□□ 0.6
TRIM2Q9C040 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
TRIM2Q9C040 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC18.77■□□□□ 0.6
TRIM2Q9C040 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC18.77■□□□□ 0.6
TRIM2Q9C040 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC18.77■□□□□ 0.6
TRIM2Q9C040 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRIM2Q9C040 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
TRIM2Q9C040 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC18.77■□□□□ 0.6
TRIM2Q9C040 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
TRIM2Q9C040 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC18.77■□□□□ 0.59
TRIM2Q9C040 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
TRIM2Q9C040 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC18.77■□□□□ 0.59
TRIM2Q9C040 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC18.77■□□□□ 0.59
TRIM2Q9C040 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC18.76■□□□□ 0.59
TRIM2Q9C040 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC18.76■□□□□ 0.59
TRIM2Q9C040 RBM17P2-201ENST00000616397 1405 ntBASIC18.76■□□□□ 0.59
TRIM2Q9C040 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
TRIM2Q9C040 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TRIM2Q9C040 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRIM2Q9C040 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TRIM2Q9C040 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC18.76■□□□□ 0.59
TRIM2Q9C040 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TRIM2Q9C040 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC18.76■□□□□ 0.59
TRIM2Q9C040 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TRIM2Q9C040 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC18.76■□□□□ 0.59
TRIM2Q9C040 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TRIM2Q9C040 FGF8-207ENST00000618991 856 ntTSL 3 BASIC18.76■□□□□ 0.59
TRIM2Q9C040 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRIM2Q9C040 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC18.76■□□□□ 0.59
TRIM2Q9C040 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TRIM2Q9C040 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
TRIM2Q9C040 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TRIM2Q9C040 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
TRIM2Q9C040 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
TRIM2Q9C040 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
TRIM2Q9C040 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TRIM2Q9C040 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TRIM2Q9C040 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TRIM2Q9C040 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC18.75■□□□□ 0.59
TRIM2Q9C040 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC18.75■□□□□ 0.59
TRIM2Q9C040 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
TRIM2Q9C040 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC18.75■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms