Protein–RNA interactions for Protein: Q9BU61

NDUFAF3, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFAF3Q9BU61 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
NDUFAF3Q9BU61 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
NDUFAF3Q9BU61 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
NDUFAF3Q9BU61 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
NDUFAF3Q9BU61 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
NDUFAF3Q9BU61 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC15.7■□□□□ 0.1
NDUFAF3Q9BU61 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
NDUFAF3Q9BU61 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
NDUFAF3Q9BU61 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
NDUFAF3Q9BU61 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC15.7■□□□□ 0.1
NDUFAF3Q9BU61 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
NDUFAF3Q9BU61 GABARAPL3-202ENST00000624044 1851 ntBASIC15.7■□□□□ 0.1
NDUFAF3Q9BU61 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
NDUFAF3Q9BU61 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC15.7■□□□□ 0.1
NDUFAF3Q9BU61 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
NDUFAF3Q9BU61 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
NDUFAF3Q9BU61 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
NDUFAF3Q9BU61 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
NDUFAF3Q9BU61 AC099791.1-201ENST00000416440 715 ntBASIC15.7■□□□□ 0.1
NDUFAF3Q9BU61 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
NDUFAF3Q9BU61 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC15.7■□□□□ 0.1
NDUFAF3Q9BU61 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
NDUFAF3Q9BU61 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
NDUFAF3Q9BU61 pRNA.6-201ENST00000610482 90 ntBASIC15.7■□□□□ 0.1
NDUFAF3Q9BU61 pRNA.5-201ENST00000612139 90 ntBASIC15.7■□□□□ 0.1
NDUFAF3Q9BU61 pRNA.11-201ENST00000618423 90 ntBASIC15.7■□□□□ 0.1
NDUFAF3Q9BU61 pRNA.13-201ENST00000619112 90 ntBASIC15.7■□□□□ 0.1
NDUFAF3Q9BU61 AC068587.7-201ENST00000641602 218 ntBASIC15.7■□□□□ 0.1
NDUFAF3Q9BU61 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
NDUFAF3Q9BU61 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
NDUFAF3Q9BU61 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
NDUFAF3Q9BU61 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
NDUFAF3Q9BU61 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
NDUFAF3Q9BU61 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
NDUFAF3Q9BU61 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
NDUFAF3Q9BU61 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
NDUFAF3Q9BU61 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
NDUFAF3Q9BU61 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
NDUFAF3Q9BU61 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
NDUFAF3Q9BU61 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
NDUFAF3Q9BU61 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC15.69■□□□□ 0.1
NDUFAF3Q9BU61 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC15.69■□□□□ 0.1
NDUFAF3Q9BU61 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
NDUFAF3Q9BU61 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC15.69■□□□□ 0.1
NDUFAF3Q9BU61 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC15.69■□□□□ 0.1
NDUFAF3Q9BU61 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
NDUFAF3Q9BU61 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
NDUFAF3Q9BU61 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
NDUFAF3Q9BU61 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
NDUFAF3Q9BU61 RBM38-205ENST00000440234 686 ntTSL 2 BASIC15.69■□□□□ 0.1
NDUFAF3Q9BU61 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
NDUFAF3Q9BU61 MAG-206ENST00000597035 542 ntTSL 4 BASIC15.69■□□□□ 0.1
NDUFAF3Q9BU61 AC233992.3-201ENST00000607491 485 ntBASIC15.69■□□□□ 0.1
NDUFAF3Q9BU61 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
NDUFAF3Q9BU61 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
NDUFAF3Q9BU61 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
NDUFAF3Q9BU61 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
NDUFAF3Q9BU61 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC15.69■□□□□ 0.1
NDUFAF3Q9BU61 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
NDUFAF3Q9BU61 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
NDUFAF3Q9BU61 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
NDUFAF3Q9BU61 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
NDUFAF3Q9BU61 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
NDUFAF3Q9BU61 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
NDUFAF3Q9BU61 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
NDUFAF3Q9BU61 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
NDUFAF3Q9BU61 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
NDUFAF3Q9BU61 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
NDUFAF3Q9BU61 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
NDUFAF3Q9BU61 AC004687.1-201ENST00000579003 1625 ntBASIC15.68■□□□□ 0.1
NDUFAF3Q9BU61 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NDUFAF3Q9BU61 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NDUFAF3Q9BU61 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC15.68■□□□□ 0.1
NDUFAF3Q9BU61 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NDUFAF3Q9BU61 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC15.68■□□□□ 0.1
NDUFAF3Q9BU61 Z98882.1-201ENST00000622160 2253 ntBASIC15.68■□□□□ 0.1
NDUFAF3Q9BU61 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC15.68■□□□□ 0.1
NDUFAF3Q9BU61 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NDUFAF3Q9BU61 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NDUFAF3Q9BU61 BX842568.3-201ENST00000418104 571 ntBASIC15.68■□□□□ 0.1
NDUFAF3Q9BU61 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC15.68■□□□□ 0.1
NDUFAF3Q9BU61 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NDUFAF3Q9BU61 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
NDUFAF3Q9BU61 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NDUFAF3Q9BU61 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC15.68■□□□□ 0.1
NDUFAF3Q9BU61 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
NDUFAF3Q9BU61 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
NDUFAF3Q9BU61 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
NDUFAF3Q9BU61 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC15.67■□□□□ 0.1
NDUFAF3Q9BU61 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NDUFAF3Q9BU61 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
NDUFAF3Q9BU61 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC15.67■□□□□ 0.1
NDUFAF3Q9BU61 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
NDUFAF3Q9BU61 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
NDUFAF3Q9BU61 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NDUFAF3Q9BU61 STOX2-205ENST00000513034 807 ntTSL 3 BASIC15.67■□□□□ 0.1
NDUFAF3Q9BU61 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
NDUFAF3Q9BU61 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC15.67■□□□□ 0.1
NDUFAF3Q9BU61 MIR5787-201ENST00000611784 55 ntBASIC15.67■□□□□ 0.1
NDUFAF3Q9BU61 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC15.67■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms