Protein–RNA interactions for Protein: Q9BSH3

NICN1, Nicolin-1, humanhuman

Predictions only

Length 213 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NICN1Q9BSH3 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
NICN1Q9BSH3 AP004607.4-201ENST00000530158 1459 ntBASIC17.53■□□□□ 0.4
NICN1Q9BSH3 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NICN1Q9BSH3 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC17.53■□□□□ 0.4
NICN1Q9BSH3 AC027682.1-201ENST00000562846 899 ntBASIC17.53■□□□□ 0.4
NICN1Q9BSH3 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC17.53■□□□□ 0.4
NICN1Q9BSH3 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
NICN1Q9BSH3 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NICN1Q9BSH3 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
NICN1Q9BSH3 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
NICN1Q9BSH3 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC17.52■□□□□ 0.4
NICN1Q9BSH3 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC17.52■□□□□ 0.4
NICN1Q9BSH3 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
NICN1Q9BSH3 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
NICN1Q9BSH3 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
NICN1Q9BSH3 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC17.52■□□□□ 0.4
NICN1Q9BSH3 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC17.52■□□□□ 0.4
NICN1Q9BSH3 MAG-206ENST00000597035 542 ntTSL 4 BASIC17.52■□□□□ 0.4
NICN1Q9BSH3 AC053503.5-201ENST00000601508 636 ntBASIC17.52■□□□□ 0.4
NICN1Q9BSH3 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
NICN1Q9BSH3 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
NICN1Q9BSH3 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
NICN1Q9BSH3 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC17.52■□□□□ 0.4
NICN1Q9BSH3 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
NICN1Q9BSH3 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
NICN1Q9BSH3 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
NICN1Q9BSH3 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
NICN1Q9BSH3 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC17.52■□□□□ 0.39
NICN1Q9BSH3 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
NICN1Q9BSH3 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC17.52■□□□□ 0.39
NICN1Q9BSH3 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC17.52■□□□□ 0.39
NICN1Q9BSH3 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
NICN1Q9BSH3 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC17.51■□□□□ 0.39
NICN1Q9BSH3 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC17.51■□□□□ 0.39
NICN1Q9BSH3 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
NICN1Q9BSH3 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
NICN1Q9BSH3 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
NICN1Q9BSH3 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NICN1Q9BSH3 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC17.51■□□□□ 0.39
NICN1Q9BSH3 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NICN1Q9BSH3 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NICN1Q9BSH3 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC17.51■□□□□ 0.39
NICN1Q9BSH3 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NICN1Q9BSH3 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC17.51■□□□□ 0.39
NICN1Q9BSH3 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC17.51■□□□□ 0.39
NICN1Q9BSH3 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
NICN1Q9BSH3 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
NICN1Q9BSH3 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
NICN1Q9BSH3 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC17.51■□□□□ 0.39
NICN1Q9BSH3 GRAMD4P4-201ENST00000613563 1115 ntBASIC17.51■□□□□ 0.39
NICN1Q9BSH3 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
NICN1Q9BSH3 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
NICN1Q9BSH3 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC17.51■□□□□ 0.39
NICN1Q9BSH3 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NICN1Q9BSH3 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC17.51■□□□□ 0.39
NICN1Q9BSH3 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
NICN1Q9BSH3 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NICN1Q9BSH3 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NICN1Q9BSH3 MIR572-201ENST00000384983 95 ntBASIC17.5■□□□□ 0.39
NICN1Q9BSH3 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC17.5■□□□□ 0.39
NICN1Q9BSH3 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC17.5■□□□□ 0.39
NICN1Q9BSH3 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
NICN1Q9BSH3 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
NICN1Q9BSH3 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NICN1Q9BSH3 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NICN1Q9BSH3 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NICN1Q9BSH3 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
NICN1Q9BSH3 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC17.5■□□□□ 0.39
NICN1Q9BSH3 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NICN1Q9BSH3 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC17.5■□□□□ 0.39
NICN1Q9BSH3 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC17.5■□□□□ 0.39
NICN1Q9BSH3 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
NICN1Q9BSH3 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NICN1Q9BSH3 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
NICN1Q9BSH3 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
NICN1Q9BSH3 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC17.5■□□□□ 0.39
NICN1Q9BSH3 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NICN1Q9BSH3 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
NICN1Q9BSH3 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NICN1Q9BSH3 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NICN1Q9BSH3 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NICN1Q9BSH3 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC17.49■□□□□ 0.39
NICN1Q9BSH3 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
NICN1Q9BSH3 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC17.49■□□□□ 0.39
NICN1Q9BSH3 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC17.49■□□□□ 0.39
NICN1Q9BSH3 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NICN1Q9BSH3 MFF-207ENST00000409565 1548 ntTSL 2 BASIC17.49■□□□□ 0.39
NICN1Q9BSH3 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
NICN1Q9BSH3 AP001330.3-201ENST00000520123 633 ntBASIC17.49■□□□□ 0.39
NICN1Q9BSH3 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC17.49■□□□□ 0.39
NICN1Q9BSH3 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
NICN1Q9BSH3 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC17.49■□□□□ 0.39
NICN1Q9BSH3 STAC-204ENST00000457375 1366 ntTSL 2 BASIC17.49■□□□□ 0.39
NICN1Q9BSH3 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC17.49■□□□□ 0.39
NICN1Q9BSH3 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NICN1Q9BSH3 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC17.49■□□□□ 0.39
NICN1Q9BSH3 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
NICN1Q9BSH3 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
NICN1Q9BSH3 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NICN1Q9BSH3 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms