Protein–RNA interactions for Protein: Q96JS3

PGBD1, PiggyBac transposable element-derived protein 1, humanhuman

Predictions only

Length 809 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD1Q96JS3 AC112229.1-201ENST00000639295 961 ntBASIC23.8■■□□□ 1.4
PGBD1Q96JS3 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC23.8■■□□□ 1.4
PGBD1Q96JS3 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
PGBD1Q96JS3 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC23.8■■□□□ 1.4
PGBD1Q96JS3 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC23.79■■□□□ 1.4
PGBD1Q96JS3 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC23.79■■□□□ 1.4
PGBD1Q96JS3 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
PGBD1Q96JS3 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
PGBD1Q96JS3 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
PGBD1Q96JS3 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC23.79■■□□□ 1.4
PGBD1Q96JS3 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC23.79■■□□□ 1.4
PGBD1Q96JS3 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC23.79■■□□□ 1.4
PGBD1Q96JS3 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
PGBD1Q96JS3 APTR-203ENST00000430801 583 ntTSL 5 BASIC23.79■■□□□ 1.4
PGBD1Q96JS3 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC23.79■■□□□ 1.4
PGBD1Q96JS3 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
PGBD1Q96JS3 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
PGBD1Q96JS3 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC23.79■■□□□ 1.4
PGBD1Q96JS3 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC23.79■■□□□ 1.4
PGBD1Q96JS3 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
PGBD1Q96JS3 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC23.78■■□□□ 1.4
PGBD1Q96JS3 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC23.78■■□□□ 1.4
PGBD1Q96JS3 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC23.78■■□□□ 1.4
PGBD1Q96JS3 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
PGBD1Q96JS3 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC23.78■■□□□ 1.4
PGBD1Q96JS3 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC23.78■■□□□ 1.4
PGBD1Q96JS3 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC23.78■■□□□ 1.4
PGBD1Q96JS3 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC23.78■■□□□ 1.4
PGBD1Q96JS3 PARP1-210ENST00000629232 477 ntTSL 5 BASIC23.78■■□□□ 1.4
PGBD1Q96JS3 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC23.78■■□□□ 1.4
PGBD1Q96JS3 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
PGBD1Q96JS3 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC23.78■■□□□ 1.4
PGBD1Q96JS3 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
PGBD1Q96JS3 AC245052.3-201ENST00000450182 901 ntBASIC23.77■■□□□ 1.4
PGBD1Q96JS3 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
PGBD1Q96JS3 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC23.77■■□□□ 1.4
PGBD1Q96JS3 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC23.77■■□□□ 1.4
PGBD1Q96JS3 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC23.77■■□□□ 1.4
PGBD1Q96JS3 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
PGBD1Q96JS3 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
PGBD1Q96JS3 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC23.77■■□□□ 1.4
PGBD1Q96JS3 AL391422.3-201ENST00000603791 2761 ntBASIC23.77■■□□□ 1.4
PGBD1Q96JS3 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC23.77■■□□□ 1.4
PGBD1Q96JS3 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC23.77■■□□□ 1.4
PGBD1Q96JS3 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC23.76■■□□□ 1.39
PGBD1Q96JS3 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC23.76■■□□□ 1.39
PGBD1Q96JS3 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
PGBD1Q96JS3 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
PGBD1Q96JS3 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
PGBD1Q96JS3 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
PGBD1Q96JS3 AC007225.1-201ENST00000566331 1836 ntBASIC23.76■■□□□ 1.39
PGBD1Q96JS3 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
PGBD1Q96JS3 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC23.76■■□□□ 1.39
PGBD1Q96JS3 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC23.76■■□□□ 1.39
PGBD1Q96JS3 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
PGBD1Q96JS3 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC23.76■■□□□ 1.39
PGBD1Q96JS3 AC091799.1-201ENST00000422823 811 ntBASIC23.76■■□□□ 1.39
PGBD1Q96JS3 CYP2T1P-201ENST00000432607 1285 ntBASIC23.76■■□□□ 1.39
PGBD1Q96JS3 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC23.76■■□□□ 1.39
PGBD1Q96JS3 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC23.76■■□□□ 1.39
PGBD1Q96JS3 AC243732.1-201ENST00000612648 864 ntBASIC23.76■■□□□ 1.39
PGBD1Q96JS3 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC23.76■■□□□ 1.39
PGBD1Q96JS3 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC23.76■■□□□ 1.39
PGBD1Q96JS3 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC23.76■■□□□ 1.39
PGBD1Q96JS3 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
PGBD1Q96JS3 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
PGBD1Q96JS3 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC23.76■■□□□ 1.39
PGBD1Q96JS3 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
PGBD1Q96JS3 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC23.75■■□□□ 1.39
PGBD1Q96JS3 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC23.75■■□□□ 1.39
PGBD1Q96JS3 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC23.75■■□□□ 1.39
PGBD1Q96JS3 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC23.75■■□□□ 1.39
PGBD1Q96JS3 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC23.75■■□□□ 1.39
PGBD1Q96JS3 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC23.75■■□□□ 1.39
PGBD1Q96JS3 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC23.75■■□□□ 1.39
PGBD1Q96JS3 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC23.75■■□□□ 1.39
PGBD1Q96JS3 AC016405.3-201ENST00000607710 860 ntBASIC23.75■■□□□ 1.39
PGBD1Q96JS3 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
PGBD1Q96JS3 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC23.75■■□□□ 1.39
PGBD1Q96JS3 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
PGBD1Q96JS3 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC23.75■■□□□ 1.39
PGBD1Q96JS3 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC23.74■■□□□ 1.39
PGBD1Q96JS3 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
PGBD1Q96JS3 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
PGBD1Q96JS3 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
PGBD1Q96JS3 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC23.74■■□□□ 1.39
PGBD1Q96JS3 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
PGBD1Q96JS3 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
PGBD1Q96JS3 HLA-L-209ENST00000420110 1011 ntBASIC23.74■■□□□ 1.39
PGBD1Q96JS3 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC23.74■■□□□ 1.39
PGBD1Q96JS3 AC007322.4-201ENST00000509611 723 ntBASIC23.74■■□□□ 1.39
PGBD1Q96JS3 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC23.74■■□□□ 1.39
PGBD1Q96JS3 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC23.74■■□□□ 1.39
PGBD1Q96JS3 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
PGBD1Q96JS3 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
PGBD1Q96JS3 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
PGBD1Q96JS3 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC23.73■■□□□ 1.39
PGBD1Q96JS3 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
PGBD1Q96JS3 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC23.73■■□□□ 1.39
PGBD1Q96JS3 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC23.73■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms