Protein–RNA interactions for Protein: Q96CX6

LRRC58, Leucine-rich repeat-containing protein 58, humanhuman

Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC58Q96CX6 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LRRC58Q96CX6 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LRRC58Q96CX6 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
LRRC58Q96CX6 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
LRRC58Q96CX6 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
LRRC58Q96CX6 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
LRRC58Q96CX6 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC19.44■□□□□ 0.7
LRRC58Q96CX6 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC19.44■□□□□ 0.7
LRRC58Q96CX6 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LRRC58Q96CX6 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC19.43■□□□□ 0.7
LRRC58Q96CX6 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LRRC58Q96CX6 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC19.43■□□□□ 0.7
LRRC58Q96CX6 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
LRRC58Q96CX6 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LRRC58Q96CX6 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC19.43■□□□□ 0.7
LRRC58Q96CX6 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
LRRC58Q96CX6 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LRRC58Q96CX6 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC19.43■□□□□ 0.7
LRRC58Q96CX6 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LRRC58Q96CX6 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LRRC58Q96CX6 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
LRRC58Q96CX6 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC19.43■□□□□ 0.7
LRRC58Q96CX6 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
LRRC58Q96CX6 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC19.43■□□□□ 0.7
LRRC58Q96CX6 AL136162.1-201ENST00000607711 1078 ntBASIC19.43■□□□□ 0.7
LRRC58Q96CX6 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
LRRC58Q96CX6 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC19.43■□□□□ 0.7
LRRC58Q96CX6 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC19.43■□□□□ 0.7
LRRC58Q96CX6 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
LRRC58Q96CX6 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LRRC58Q96CX6 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC19.43■□□□□ 0.7
LRRC58Q96CX6 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
LRRC58Q96CX6 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC19.43■□□□□ 0.7
LRRC58Q96CX6 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
LRRC58Q96CX6 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LRRC58Q96CX6 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
LRRC58Q96CX6 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
LRRC58Q96CX6 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC19.42■□□□□ 0.7
LRRC58Q96CX6 AC125437.2-201ENST00000625180 2167 ntBASIC19.42■□□□□ 0.7
LRRC58Q96CX6 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LRRC58Q96CX6 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
LRRC58Q96CX6 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC19.42■□□□□ 0.7
LRRC58Q96CX6 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
LRRC58Q96CX6 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
LRRC58Q96CX6 AC116562.4-201ENST00000641316 2276 ntBASIC19.42■□□□□ 0.7
LRRC58Q96CX6 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LRRC58Q96CX6 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LRRC58Q96CX6 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC19.42■□□□□ 0.7
LRRC58Q96CX6 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LRRC58Q96CX6 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LRRC58Q96CX6 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
LRRC58Q96CX6 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
LRRC58Q96CX6 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
LRRC58Q96CX6 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
LRRC58Q96CX6 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC19.42■□□□□ 0.7
LRRC58Q96CX6 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LRRC58Q96CX6 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LRRC58Q96CX6 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
LRRC58Q96CX6 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
LRRC58Q96CX6 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LRRC58Q96CX6 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
LRRC58Q96CX6 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC19.41■□□□□ 0.7
LRRC58Q96CX6 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC19.41■□□□□ 0.7
LRRC58Q96CX6 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LRRC58Q96CX6 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LRRC58Q96CX6 AC099791.1-201ENST00000416440 715 ntBASIC19.41■□□□□ 0.7
LRRC58Q96CX6 GRAMD4P2-201ENST00000423297 1097 ntBASIC19.41■□□□□ 0.7
LRRC58Q96CX6 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC19.41■□□□□ 0.7
LRRC58Q96CX6 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC19.41■□□□□ 0.7
LRRC58Q96CX6 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LRRC58Q96CX6 AC135279.3-201ENST00000610945 1311 ntBASIC19.41■□□□□ 0.7
LRRC58Q96CX6 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
LRRC58Q96CX6 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC19.41■□□□□ 0.7
LRRC58Q96CX6 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LRRC58Q96CX6 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC19.41■□□□□ 0.7
LRRC58Q96CX6 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
LRRC58Q96CX6 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
LRRC58Q96CX6 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
LRRC58Q96CX6 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC19.41■□□□□ 0.7
LRRC58Q96CX6 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
LRRC58Q96CX6 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
LRRC58Q96CX6 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LRRC58Q96CX6 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LRRC58Q96CX6 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC19.4■□□□□ 0.7
LRRC58Q96CX6 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LRRC58Q96CX6 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
LRRC58Q96CX6 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC19.4■□□□□ 0.7
LRRC58Q96CX6 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC19.4■□□□□ 0.7
LRRC58Q96CX6 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC19.4■□□□□ 0.7
LRRC58Q96CX6 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
LRRC58Q96CX6 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
LRRC58Q96CX6 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC19.39■□□□□ 0.7
LRRC58Q96CX6 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
LRRC58Q96CX6 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
LRRC58Q96CX6 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
LRRC58Q96CX6 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
LRRC58Q96CX6 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
LRRC58Q96CX6 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC19.39■□□□□ 0.69
LRRC58Q96CX6 POU5F1P4-201ENST00000413175 1085 ntBASIC19.39■□□□□ 0.69
LRRC58Q96CX6 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC19.39■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms