Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC19.63■□□□□ 0.73
VPS33AQ96AX1 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC19.63■□□□□ 0.73
VPS33AQ96AX1 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
VPS33AQ96AX1 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
VPS33AQ96AX1 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
VPS33AQ96AX1 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
VPS33AQ96AX1 MFF-207ENST00000409565 1548 ntTSL 2 BASIC19.63■□□□□ 0.73
VPS33AQ96AX1 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC19.63■□□□□ 0.73
VPS33AQ96AX1 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
VPS33AQ96AX1 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC19.63■□□□□ 0.73
VPS33AQ96AX1 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC19.63■□□□□ 0.73
VPS33AQ96AX1 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC19.63■□□□□ 0.73
VPS33AQ96AX1 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
VPS33AQ96AX1 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC19.63■□□□□ 0.73
VPS33AQ96AX1 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
VPS33AQ96AX1 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
VPS33AQ96AX1 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
VPS33AQ96AX1 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
VPS33AQ96AX1 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC19.63■□□□□ 0.73
VPS33AQ96AX1 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
VPS33AQ96AX1 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
VPS33AQ96AX1 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC19.62■□□□□ 0.73
VPS33AQ96AX1 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
VPS33AQ96AX1 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
VPS33AQ96AX1 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC19.62■□□□□ 0.73
VPS33AQ96AX1 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
VPS33AQ96AX1 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC19.62■□□□□ 0.73
VPS33AQ96AX1 STAC-204ENST00000457375 1366 ntTSL 2 BASIC19.62■□□□□ 0.73
VPS33AQ96AX1 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
VPS33AQ96AX1 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
VPS33AQ96AX1 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC19.62■□□□□ 0.73
VPS33AQ96AX1 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC19.62■□□□□ 0.73
VPS33AQ96AX1 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
VPS33AQ96AX1 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
VPS33AQ96AX1 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
VPS33AQ96AX1 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
VPS33AQ96AX1 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
VPS33AQ96AX1 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
VPS33AQ96AX1 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
VPS33AQ96AX1 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
VPS33AQ96AX1 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC19.61■□□□□ 0.73
VPS33AQ96AX1 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
VPS33AQ96AX1 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC19.61■□□□□ 0.73
VPS33AQ96AX1 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC19.61■□□□□ 0.73
VPS33AQ96AX1 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
VPS33AQ96AX1 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
VPS33AQ96AX1 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
VPS33AQ96AX1 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
VPS33AQ96AX1 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC19.61■□□□□ 0.73
VPS33AQ96AX1 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
VPS33AQ96AX1 AC106739.1-201ENST00000617035 715 ntBASIC19.61■□□□□ 0.73
VPS33AQ96AX1 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC19.61■□□□□ 0.73
VPS33AQ96AX1 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
VPS33AQ96AX1 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
VPS33AQ96AX1 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
VPS33AQ96AX1 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC19.61■□□□□ 0.73
VPS33AQ96AX1 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC19.61■□□□□ 0.73
VPS33AQ96AX1 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC19.61■□□□□ 0.73
VPS33AQ96AX1 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC19.61■□□□□ 0.73
VPS33AQ96AX1 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
VPS33AQ96AX1 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
VPS33AQ96AX1 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
VPS33AQ96AX1 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC19.6■□□□□ 0.73
VPS33AQ96AX1 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
VPS33AQ96AX1 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
VPS33AQ96AX1 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC19.6■□□□□ 0.73
VPS33AQ96AX1 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC19.6■□□□□ 0.73
VPS33AQ96AX1 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC19.6■□□□□ 0.73
VPS33AQ96AX1 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC19.6■□□□□ 0.73
VPS33AQ96AX1 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC19.6■□□□□ 0.73
VPS33AQ96AX1 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
VPS33AQ96AX1 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
VPS33AQ96AX1 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
VPS33AQ96AX1 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC19.6■□□□□ 0.73
VPS33AQ96AX1 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
VPS33AQ96AX1 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
VPS33AQ96AX1 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
VPS33AQ96AX1 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
VPS33AQ96AX1 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
VPS33AQ96AX1 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
VPS33AQ96AX1 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC19.59■□□□□ 0.73
VPS33AQ96AX1 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
VPS33AQ96AX1 MPST-204ENST00000404393 1329 ntTSL 5 BASIC19.59■□□□□ 0.73
VPS33AQ96AX1 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
VPS33AQ96AX1 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC19.59■□□□□ 0.73
VPS33AQ96AX1 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC19.59■□□□□ 0.73
VPS33AQ96AX1 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC19.59■□□□□ 0.73
VPS33AQ96AX1 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC19.59■□□□□ 0.73
VPS33AQ96AX1 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC19.59■□□□□ 0.73
VPS33AQ96AX1 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
VPS33AQ96AX1 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
VPS33AQ96AX1 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC19.59■□□□□ 0.73
VPS33AQ96AX1 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
VPS33AQ96AX1 RASA4CP-201ENST00000424092 1398 ntBASIC19.58■□□□□ 0.73
VPS33AQ96AX1 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
VPS33AQ96AX1 AC008406.3-201ENST00000620001 1374 ntBASIC19.58■□□□□ 0.73
VPS33AQ96AX1 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
VPS33AQ96AX1 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC19.58■□□□□ 0.73
VPS33AQ96AX1 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
VPS33AQ96AX1 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 15.3 ms