Protein–RNA interactions for Protein: Q8WV48

CCDC107, Coiled-coil domain-containing protein 107, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC107Q8WV48 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC107Q8WV48 AL020996.1-203ENST00000536896 2307 ntBASIC17.65■□□□□ 0.42
CCDC107Q8WV48 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC107Q8WV48 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC107Q8WV48 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC17.65■□□□□ 0.42
CCDC107Q8WV48 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC107Q8WV48 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
CCDC107Q8WV48 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
CCDC107Q8WV48 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
CCDC107Q8WV48 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC107Q8WV48 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC107Q8WV48 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC17.64■□□□□ 0.41
CCDC107Q8WV48 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC17.64■□□□□ 0.41
CCDC107Q8WV48 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC17.64■□□□□ 0.41
CCDC107Q8WV48 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC17.64■□□□□ 0.41
CCDC107Q8WV48 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC17.64■□□□□ 0.41
CCDC107Q8WV48 AC110285.6-201ENST00000617652 491 ntBASIC17.64■□□□□ 0.41
CCDC107Q8WV48 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC17.64■□□□□ 0.41
CCDC107Q8WV48 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC107Q8WV48 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC107Q8WV48 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC107Q8WV48 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
CCDC107Q8WV48 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
CCDC107Q8WV48 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC107Q8WV48 BID-204ENST00000399767 2129 ntTSL 2 BASIC17.63■□□□□ 0.41
CCDC107Q8WV48 SMG8-203ENST00000578922 2178 ntBASIC17.63■□□□□ 0.41
CCDC107Q8WV48 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC107Q8WV48 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC107Q8WV48 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC107Q8WV48 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC107Q8WV48 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC107Q8WV48 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC17.63■□□□□ 0.41
CCDC107Q8WV48 LHPP-203ENST00000392757 840 ntTSL 3 BASIC17.63■□□□□ 0.41
CCDC107Q8WV48 NALT1-201ENST00000429224 738 ntTSL 5 BASIC17.63■□□□□ 0.41
CCDC107Q8WV48 AP001330.3-201ENST00000520123 633 ntBASIC17.63■□□□□ 0.41
CCDC107Q8WV48 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC107Q8WV48 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC17.63■□□□□ 0.41
CCDC107Q8WV48 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC17.63■□□□□ 0.41
CCDC107Q8WV48 MPST-208ENST00000628507 698 ntTSL 5 BASIC17.63■□□□□ 0.41
CCDC107Q8WV48 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC107Q8WV48 ERF-202ENST00000440177 2032 ntTSL 2 BASIC17.63■□□□□ 0.41
CCDC107Q8WV48 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC17.63■□□□□ 0.41
CCDC107Q8WV48 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC107Q8WV48 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC17.63■□□□□ 0.41
CCDC107Q8WV48 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC107Q8WV48 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC17.63■□□□□ 0.41
CCDC107Q8WV48 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC107Q8WV48 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
CCDC107Q8WV48 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC107Q8WV48 AC020907.5-201ENST00000624372 1936 ntBASIC17.62■□□□□ 0.41
CCDC107Q8WV48 AC090340.1-201ENST00000620778 4980 ntBASIC17.62■□□□□ 0.41
CCDC107Q8WV48 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC107Q8WV48 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC107Q8WV48 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC107Q8WV48 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
CCDC107Q8WV48 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC17.62■□□□□ 0.41
CCDC107Q8WV48 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC17.62■□□□□ 0.41
CCDC107Q8WV48 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
CCDC107Q8WV48 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC17.62■□□□□ 0.41
CCDC107Q8WV48 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
CCDC107Q8WV48 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC107Q8WV48 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC107Q8WV48 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
CCDC107Q8WV48 BX323043.1-201ENST00000641006 1765 ntBASIC17.62■□□□□ 0.41
CCDC107Q8WV48 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC17.62■□□□□ 0.41
CCDC107Q8WV48 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC17.62■□□□□ 0.41
CCDC107Q8WV48 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC17.62■□□□□ 0.41
CCDC107Q8WV48 AF213884.3-201ENST00000563833 479 ntBASIC17.62■□□□□ 0.41
CCDC107Q8WV48 AL355001.2-201ENST00000620617 1191 ntBASIC17.62■□□□□ 0.41
CCDC107Q8WV48 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC107Q8WV48 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC107Q8WV48 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CCDC107Q8WV48 PALM-207ENST00000590161 2137 ntTSL 4 BASIC17.62■□□□□ 0.41
CCDC107Q8WV48 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC107Q8WV48 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC107Q8WV48 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC107Q8WV48 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC107Q8WV48 EDA-201ENST00000338901 1233 ntBASIC17.61■□□□□ 0.41
CCDC107Q8WV48 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC107Q8WV48 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC17.61■□□□□ 0.41
CCDC107Q8WV48 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC17.61■□□□□ 0.41
CCDC107Q8WV48 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC17.61■□□□□ 0.41
CCDC107Q8WV48 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC17.61■□□□□ 0.41
CCDC107Q8WV48 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
CCDC107Q8WV48 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
CCDC107Q8WV48 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC17.61■□□□□ 0.41
CCDC107Q8WV48 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC107Q8WV48 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC17.61■□□□□ 0.41
CCDC107Q8WV48 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC107Q8WV48 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC107Q8WV48 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC107Q8WV48 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC107Q8WV48 AC027702.1-201ENST00000563810 1770 ntBASIC17.61■□□□□ 0.41
CCDC107Q8WV48 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
CCDC107Q8WV48 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC107Q8WV48 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC107Q8WV48 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC107Q8WV48 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC107Q8WV48 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC107Q8WV48 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms