Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC25.14■■□□□ 1.62
SNED1Q8TER0 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC25.14■■□□□ 1.62
SNED1Q8TER0 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
SNED1Q8TER0 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
SNED1Q8TER0 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC25.14■■□□□ 1.62
SNED1Q8TER0 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC25.14■■□□□ 1.61
SNED1Q8TER0 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC25.14■■□□□ 1.61
SNED1Q8TER0 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC25.14■■□□□ 1.61
SNED1Q8TER0 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC25.14■■□□□ 1.61
SNED1Q8TER0 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC25.14■■□□□ 1.61
SNED1Q8TER0 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC25.14■■□□□ 1.61
SNED1Q8TER0 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC25.13■■□□□ 1.61
SNED1Q8TER0 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC25.13■■□□□ 1.61
SNED1Q8TER0 AL445228.2-201ENST00000605589 952 ntBASIC25.13■■□□□ 1.61
SNED1Q8TER0 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
SNED1Q8TER0 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
SNED1Q8TER0 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC25.13■■□□□ 1.61
SNED1Q8TER0 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC25.13■■□□□ 1.61
SNED1Q8TER0 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
SNED1Q8TER0 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
SNED1Q8TER0 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC25.13■■□□□ 1.61
SNED1Q8TER0 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
SNED1Q8TER0 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC25.13■■□□□ 1.61
SNED1Q8TER0 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
SNED1Q8TER0 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC25.13■■□□□ 1.61
SNED1Q8TER0 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
SNED1Q8TER0 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
SNED1Q8TER0 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC25.12■■□□□ 1.61
SNED1Q8TER0 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
SNED1Q8TER0 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC25.12■■□□□ 1.61
SNED1Q8TER0 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
SNED1Q8TER0 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC25.12■■□□□ 1.61
SNED1Q8TER0 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC25.12■■□□□ 1.61
SNED1Q8TER0 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
SNED1Q8TER0 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
SNED1Q8TER0 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
SNED1Q8TER0 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC25.12■■□□□ 1.61
SNED1Q8TER0 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC25.12■■□□□ 1.61
SNED1Q8TER0 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC25.12■■□□□ 1.61
SNED1Q8TER0 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC25.12■■□□□ 1.61
SNED1Q8TER0 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC25.12■■□□□ 1.61
SNED1Q8TER0 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC25.12■■□□□ 1.61
SNED1Q8TER0 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
SNED1Q8TER0 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
SNED1Q8TER0 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC25.12■■□□□ 1.61
SNED1Q8TER0 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC25.11■■□□□ 1.61
SNED1Q8TER0 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC25.11■■□□□ 1.61
SNED1Q8TER0 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC25.11■■□□□ 1.61
SNED1Q8TER0 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
SNED1Q8TER0 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
SNED1Q8TER0 TERT-206ENST00000508104 2486 ntTSL 5 BASIC25.11■■□□□ 1.61
SNED1Q8TER0 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC25.11■■□□□ 1.61
SNED1Q8TER0 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
SNED1Q8TER0 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC25.11■■□□□ 1.61
SNED1Q8TER0 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC25.11■■□□□ 1.61
SNED1Q8TER0 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC25.11■■□□□ 1.61
SNED1Q8TER0 RN7SL850P-201ENST00000579959 291 ntBASIC25.11■■□□□ 1.61
SNED1Q8TER0 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC25.11■■□□□ 1.61
SNED1Q8TER0 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC25.11■■□□□ 1.61
SNED1Q8TER0 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC25.11■■□□□ 1.61
SNED1Q8TER0 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
SNED1Q8TER0 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC25.1■■□□□ 1.61
SNED1Q8TER0 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
SNED1Q8TER0 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
SNED1Q8TER0 RER1-204ENST00000378518 522 ntTSL 3 BASIC25.1■■□□□ 1.61
SNED1Q8TER0 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
SNED1Q8TER0 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC25.1■■□□□ 1.61
SNED1Q8TER0 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC25.1■■□□□ 1.61
SNED1Q8TER0 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC25.1■■□□□ 1.61
SNED1Q8TER0 CD177P1-201ENST00000606252 935 ntBASIC25.1■■□□□ 1.61
SNED1Q8TER0 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC25.1■■□□□ 1.61
SNED1Q8TER0 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC25.09■■□□□ 1.61
SNED1Q8TER0 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC25.09■■□□□ 1.61
SNED1Q8TER0 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
SNED1Q8TER0 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC25.09■■□□□ 1.61
SNED1Q8TER0 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC25.09■■□□□ 1.61
SNED1Q8TER0 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC25.09■■□□□ 1.61
SNED1Q8TER0 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
SNED1Q8TER0 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC25.09■■□□□ 1.61
SNED1Q8TER0 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC25.09■■□□□ 1.61
SNED1Q8TER0 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC25.09■■□□□ 1.61
SNED1Q8TER0 BRWD1-AS2-201ENST00000603064 1028 ntBASIC25.09■■□□□ 1.61
SNED1Q8TER0 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC25.09■■□□□ 1.61
SNED1Q8TER0 AL356652.1-201ENST00000615962 565 ntBASIC25.09■■□□□ 1.61
SNED1Q8TER0 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
SNED1Q8TER0 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
SNED1Q8TER0 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
SNED1Q8TER0 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
SNED1Q8TER0 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
SNED1Q8TER0 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC25.08■■□□□ 1.61
SNED1Q8TER0 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
SNED1Q8TER0 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC25.08■■□□□ 1.61
SNED1Q8TER0 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
SNED1Q8TER0 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
SNED1Q8TER0 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC25.08■■□□□ 1.61
SNED1Q8TER0 Six3os1_6.1-201ENST00000620790 196 ntBASIC25.08■■□□□ 1.61
SNED1Q8TER0 CABP2-204ENST00000636477 941 ntTSL 5 BASIC25.08■■□□□ 1.61
SNED1Q8TER0 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC25.08■■□□□ 1.6
SNED1Q8TER0 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
SNED1Q8TER0 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms