Protein–RNA interactions for Protein: Q8TBN0

RAB3IL1, Guanine nucleotide exchange factor for Rab-3A, humanhuman

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IL1Q8TBN0 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RAB3IL1Q8TBN0 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RAB3IL1Q8TBN0 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RAB3IL1Q8TBN0 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RAB3IL1Q8TBN0 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC20.35■□□□□ 0.85
RAB3IL1Q8TBN0 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RAB3IL1Q8TBN0 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
RAB3IL1Q8TBN0 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RAB3IL1Q8TBN0 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RAB3IL1Q8TBN0 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RAB3IL1Q8TBN0 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC20.35■□□□□ 0.85
RAB3IL1Q8TBN0 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
RAB3IL1Q8TBN0 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
RAB3IL1Q8TBN0 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
RAB3IL1Q8TBN0 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
RAB3IL1Q8TBN0 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC20.35■□□□□ 0.85
RAB3IL1Q8TBN0 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC20.35■□□□□ 0.85
RAB3IL1Q8TBN0 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC20.35■□□□□ 0.85
RAB3IL1Q8TBN0 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC20.35■□□□□ 0.85
RAB3IL1Q8TBN0 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC20.35■□□□□ 0.85
RAB3IL1Q8TBN0 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
RAB3IL1Q8TBN0 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
RAB3IL1Q8TBN0 AC112907.3-201ENST00000577781 2400 ntBASIC20.35■□□□□ 0.85
RAB3IL1Q8TBN0 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
RAB3IL1Q8TBN0 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RAB3IL1Q8TBN0 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
RAB3IL1Q8TBN0 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RAB3IL1Q8TBN0 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
RAB3IL1Q8TBN0 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RAB3IL1Q8TBN0 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RAB3IL1Q8TBN0 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RAB3IL1Q8TBN0 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC20.34■□□□□ 0.85
RAB3IL1Q8TBN0 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC20.34■□□□□ 0.85
RAB3IL1Q8TBN0 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC20.34■□□□□ 0.85
RAB3IL1Q8TBN0 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RAB3IL1Q8TBN0 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RAB3IL1Q8TBN0 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
RAB3IL1Q8TBN0 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
RAB3IL1Q8TBN0 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RAB3IL1Q8TBN0 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC20.34■□□□□ 0.85
RAB3IL1Q8TBN0 AC133561.4-201ENST00000566112 224 ntBASIC20.34■□□□□ 0.85
RAB3IL1Q8TBN0 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RAB3IL1Q8TBN0 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
RAB3IL1Q8TBN0 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RAB3IL1Q8TBN0 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC20.34■□□□□ 0.85
RAB3IL1Q8TBN0 SMG8-203ENST00000578922 2178 ntBASIC20.34■□□□□ 0.85
RAB3IL1Q8TBN0 PXK-203ENST00000383715 1756 ntTSL 5 BASIC20.34■□□□□ 0.85
RAB3IL1Q8TBN0 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
RAB3IL1Q8TBN0 AC008406.3-201ENST00000620001 1374 ntBASIC20.34■□□□□ 0.85
RAB3IL1Q8TBN0 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC20.33■□□□□ 0.85
RAB3IL1Q8TBN0 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
RAB3IL1Q8TBN0 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC20.33■□□□□ 0.85
RAB3IL1Q8TBN0 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC20.33■□□□□ 0.85
RAB3IL1Q8TBN0 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
RAB3IL1Q8TBN0 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC20.33■□□□□ 0.85
RAB3IL1Q8TBN0 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
RAB3IL1Q8TBN0 RNF146-206ENST00000480444 843 ntTSL 2 BASIC20.33■□□□□ 0.85
RAB3IL1Q8TBN0 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
RAB3IL1Q8TBN0 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC20.33■□□□□ 0.85
RAB3IL1Q8TBN0 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC20.33■□□□□ 0.85
RAB3IL1Q8TBN0 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC20.33■□□□□ 0.84
RAB3IL1Q8TBN0 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
RAB3IL1Q8TBN0 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.84
RAB3IL1Q8TBN0 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC20.33■□□□□ 0.84
RAB3IL1Q8TBN0 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
RAB3IL1Q8TBN0 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC20.33■□□□□ 0.84
RAB3IL1Q8TBN0 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
RAB3IL1Q8TBN0 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
RAB3IL1Q8TBN0 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
RAB3IL1Q8TBN0 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC20.32■□□□□ 0.84
RAB3IL1Q8TBN0 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RAB3IL1Q8TBN0 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RAB3IL1Q8TBN0 TCF3P1-201ENST00000423021 1937 ntBASIC20.32■□□□□ 0.84
RAB3IL1Q8TBN0 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
RAB3IL1Q8TBN0 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
RAB3IL1Q8TBN0 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC20.32■□□□□ 0.84
RAB3IL1Q8TBN0 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RAB3IL1Q8TBN0 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
RAB3IL1Q8TBN0 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC20.32■□□□□ 0.84
RAB3IL1Q8TBN0 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RAB3IL1Q8TBN0 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC20.32■□□□□ 0.84
RAB3IL1Q8TBN0 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
RAB3IL1Q8TBN0 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC20.32■□□□□ 0.84
RAB3IL1Q8TBN0 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
RAB3IL1Q8TBN0 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC20.32■□□□□ 0.84
RAB3IL1Q8TBN0 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RAB3IL1Q8TBN0 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RAB3IL1Q8TBN0 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC20.31■□□□□ 0.84
RAB3IL1Q8TBN0 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
RAB3IL1Q8TBN0 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC20.31■□□□□ 0.84
RAB3IL1Q8TBN0 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC20.31■□□□□ 0.84
RAB3IL1Q8TBN0 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC20.31■□□□□ 0.84
RAB3IL1Q8TBN0 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
RAB3IL1Q8TBN0 AC092720.2-201ENST00000602388 1665 ntBASIC20.31■□□□□ 0.84
RAB3IL1Q8TBN0 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
RAB3IL1Q8TBN0 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RAB3IL1Q8TBN0 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RAB3IL1Q8TBN0 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RAB3IL1Q8TBN0 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RAB3IL1Q8TBN0 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms