Protein–RNA interactions for Protein: Q8TBC4

UBA3, NEDD8-activating enzyme E1 catalytic subunit, humanhuman

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3Q8TBC4 AL121832.2-201ENST00000610979 668 ntBASIC21.69■■□□□ 1.06
UBA3Q8TBC4 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
UBA3Q8TBC4 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC21.69■■□□□ 1.06
UBA3Q8TBC4 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
UBA3Q8TBC4 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
UBA3Q8TBC4 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
UBA3Q8TBC4 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
UBA3Q8TBC4 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
UBA3Q8TBC4 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC21.69■■□□□ 1.06
UBA3Q8TBC4 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
UBA3Q8TBC4 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC21.68■■□□□ 1.06
UBA3Q8TBC4 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC21.68■■□□□ 1.06
UBA3Q8TBC4 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
UBA3Q8TBC4 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
UBA3Q8TBC4 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
UBA3Q8TBC4 AC010980.2-201ENST00000587099 1412 ntBASIC21.68■■□□□ 1.06
UBA3Q8TBC4 CYP21A1P-202ENST00000354927 1481 ntBASIC21.68■■□□□ 1.06
UBA3Q8TBC4 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
UBA3Q8TBC4 AC007225.1-201ENST00000566331 1836 ntBASIC21.68■■□□□ 1.06
UBA3Q8TBC4 AL121603.2-201ENST00000557373 2117 ntBASIC21.68■■□□□ 1.06
UBA3Q8TBC4 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
UBA3Q8TBC4 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
UBA3Q8TBC4 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
UBA3Q8TBC4 ME2-216ENST00000639850 2331 ntTSL 5 BASIC21.67■■□□□ 1.06
UBA3Q8TBC4 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
UBA3Q8TBC4 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
UBA3Q8TBC4 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
UBA3Q8TBC4 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
UBA3Q8TBC4 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC21.67■■□□□ 1.06
UBA3Q8TBC4 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC21.67■■□□□ 1.06
UBA3Q8TBC4 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
UBA3Q8TBC4 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
UBA3Q8TBC4 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC21.67■■□□□ 1.06
UBA3Q8TBC4 PHB2-213ENST00000546111 858 ntTSL 2 BASIC21.67■■□□□ 1.06
UBA3Q8TBC4 OAS3-207ENST00000551007 998 ntTSL 2 BASIC21.67■■□□□ 1.06
UBA3Q8TBC4 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
UBA3Q8TBC4 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC21.67■■□□□ 1.06
UBA3Q8TBC4 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
UBA3Q8TBC4 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
UBA3Q8TBC4 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
UBA3Q8TBC4 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC21.66■■□□□ 1.06
UBA3Q8TBC4 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
UBA3Q8TBC4 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC21.66■■□□□ 1.06
UBA3Q8TBC4 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
UBA3Q8TBC4 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC21.66■■□□□ 1.06
UBA3Q8TBC4 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
UBA3Q8TBC4 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
UBA3Q8TBC4 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC21.66■■□□□ 1.06
UBA3Q8TBC4 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
UBA3Q8TBC4 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
UBA3Q8TBC4 GPX1P1-201ENST00000388829 606 ntBASIC21.66■■□□□ 1.06
UBA3Q8TBC4 AL512625.2-201ENST00000417533 625 ntBASIC21.66■■□□□ 1.06
UBA3Q8TBC4 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC21.66■■□□□ 1.06
UBA3Q8TBC4 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
UBA3Q8TBC4 MIR2861-201ENST00000636310 90 ntBASIC21.66■■□□□ 1.06
UBA3Q8TBC4 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
UBA3Q8TBC4 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC21.66■■□□□ 1.06
UBA3Q8TBC4 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
UBA3Q8TBC4 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
UBA3Q8TBC4 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
UBA3Q8TBC4 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
UBA3Q8TBC4 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
UBA3Q8TBC4 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC21.65■■□□□ 1.06
UBA3Q8TBC4 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC21.65■■□□□ 1.06
UBA3Q8TBC4 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
UBA3Q8TBC4 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
UBA3Q8TBC4 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
UBA3Q8TBC4 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
UBA3Q8TBC4 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC21.65■■□□□ 1.06
UBA3Q8TBC4 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC21.65■■□□□ 1.06
UBA3Q8TBC4 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC21.65■■□□□ 1.06
UBA3Q8TBC4 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC21.65■■□□□ 1.06
UBA3Q8TBC4 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC21.65■■□□□ 1.06
UBA3Q8TBC4 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
UBA3Q8TBC4 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
UBA3Q8TBC4 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC21.65■■□□□ 1.06
UBA3Q8TBC4 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
UBA3Q8TBC4 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
UBA3Q8TBC4 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
UBA3Q8TBC4 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
UBA3Q8TBC4 MKRN4P-201ENST00000444706 1521 ntBASIC21.65■■□□□ 1.06
UBA3Q8TBC4 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
UBA3Q8TBC4 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC21.64■■□□□ 1.06
UBA3Q8TBC4 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
UBA3Q8TBC4 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
UBA3Q8TBC4 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC21.64■■□□□ 1.06
UBA3Q8TBC4 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC21.64■■□□□ 1.06
UBA3Q8TBC4 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
UBA3Q8TBC4 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
UBA3Q8TBC4 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC21.64■■□□□ 1.06
UBA3Q8TBC4 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
UBA3Q8TBC4 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
UBA3Q8TBC4 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
UBA3Q8TBC4 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC21.64■■□□□ 1.05
UBA3Q8TBC4 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
UBA3Q8TBC4 MCRIP2P1-201ENST00000394346 511 ntBASIC21.64■■□□□ 1.05
UBA3Q8TBC4 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.05
UBA3Q8TBC4 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC21.64■■□□□ 1.05
UBA3Q8TBC4 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC21.64■■□□□ 1.05
UBA3Q8TBC4 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC21.64■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms