Protein–RNA interactions for Protein: Q8NI28

LINC01006, Putative uncharacterized protein encoded by LINC01006, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006Q8NI28 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
LINC01006Q8NI28 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC16.01■□□□□ 0.15
LINC01006Q8NI28 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
LINC01006Q8NI28 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
LINC01006Q8NI28 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
LINC01006Q8NI28 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC16■□□□□ 0.15
LINC01006Q8NI28 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
LINC01006Q8NI28 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC16■□□□□ 0.15
LINC01006Q8NI28 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
LINC01006Q8NI28 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
LINC01006Q8NI28 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC16■□□□□ 0.15
LINC01006Q8NI28 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC16■□□□□ 0.15
LINC01006Q8NI28 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
LINC01006Q8NI28 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
LINC01006Q8NI28 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
LINC01006Q8NI28 ECEL1P3-201ENST00000427961 737 ntBASIC16■□□□□ 0.15
LINC01006Q8NI28 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC16■□□□□ 0.15
LINC01006Q8NI28 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC16■□□□□ 0.15
LINC01006Q8NI28 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC16■□□□□ 0.15
LINC01006Q8NI28 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC16■□□□□ 0.15
LINC01006Q8NI28 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC16■□□□□ 0.15
LINC01006Q8NI28 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC16■□□□□ 0.15
LINC01006Q8NI28 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC16■□□□□ 0.15
LINC01006Q8NI28 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
LINC01006Q8NI28 GUSBP5-202ENST00000510805 1989 ntBASIC16■□□□□ 0.15
LINC01006Q8NI28 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
LINC01006Q8NI28 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
LINC01006Q8NI28 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
LINC01006Q8NI28 MOK-233ENST00000524214 1539 ntTSL 2 BASIC15.99■□□□□ 0.15
LINC01006Q8NI28 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
LINC01006Q8NI28 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC15.99■□□□□ 0.15
LINC01006Q8NI28 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
LINC01006Q8NI28 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC15.99■□□□□ 0.15
LINC01006Q8NI28 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
LINC01006Q8NI28 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC15.99■□□□□ 0.15
LINC01006Q8NI28 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
LINC01006Q8NI28 RER1-204ENST00000378518 522 ntTSL 3 BASIC15.99■□□□□ 0.15
LINC01006Q8NI28 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
LINC01006Q8NI28 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC15.99■□□□□ 0.15
LINC01006Q8NI28 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC15.99■□□□□ 0.15
LINC01006Q8NI28 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
LINC01006Q8NI28 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
LINC01006Q8NI28 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC15.99■□□□□ 0.15
LINC01006Q8NI28 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
LINC01006Q8NI28 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
LINC01006Q8NI28 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC15.99■□□□□ 0.15
LINC01006Q8NI28 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC15.99■□□□□ 0.15
LINC01006Q8NI28 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC15.99■□□□□ 0.15
LINC01006Q8NI28 AC110285.5-201ENST00000611501 352 ntBASIC15.99■□□□□ 0.15
LINC01006Q8NI28 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
LINC01006Q8NI28 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
LINC01006Q8NI28 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC15.99■□□□□ 0.15
LINC01006Q8NI28 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
LINC01006Q8NI28 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
LINC01006Q8NI28 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
LINC01006Q8NI28 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
LINC01006Q8NI28 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
LINC01006Q8NI28 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC15.98■□□□□ 0.15
LINC01006Q8NI28 KRT17P2-201ENST00000300992 1314 ntBASIC15.98■□□□□ 0.15
LINC01006Q8NI28 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
LINC01006Q8NI28 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
LINC01006Q8NI28 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
LINC01006Q8NI28 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
LINC01006Q8NI28 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
LINC01006Q8NI28 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
LINC01006Q8NI28 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC15.98■□□□□ 0.15
LINC01006Q8NI28 AC211429.1-201ENST00000415277 523 ntBASIC15.98■□□□□ 0.15
LINC01006Q8NI28 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
LINC01006Q8NI28 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC15.98■□□□□ 0.15
LINC01006Q8NI28 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC15.98■□□□□ 0.15
LINC01006Q8NI28 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC15.98■□□□□ 0.15
LINC01006Q8NI28 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
LINC01006Q8NI28 REXO2-216ENST00000544196 452 ntTSL 3 BASIC15.98■□□□□ 0.15
LINC01006Q8NI28 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC15.98■□□□□ 0.15
LINC01006Q8NI28 AP001412.1-201ENST00000608405 714 ntBASIC15.98■□□□□ 0.15
LINC01006Q8NI28 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
LINC01006Q8NI28 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
LINC01006Q8NI28 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC15.98■□□□□ 0.15
LINC01006Q8NI28 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
LINC01006Q8NI28 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
LINC01006Q8NI28 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
LINC01006Q8NI28 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
LINC01006Q8NI28 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
LINC01006Q8NI28 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC15.97■□□□□ 0.15
LINC01006Q8NI28 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LINC01006Q8NI28 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LINC01006Q8NI28 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LINC01006Q8NI28 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC15.97■□□□□ 0.15
LINC01006Q8NI28 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
LINC01006Q8NI28 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
LINC01006Q8NI28 AL135905.2-201ENST00000584934 1404 ntBASIC15.97■□□□□ 0.15
LINC01006Q8NI28 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC15.97■□□□□ 0.15
LINC01006Q8NI28 KRASP1-201ENST00000407852 552 ntBASIC15.97■□□□□ 0.15
LINC01006Q8NI28 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
LINC01006Q8NI28 TSPY7P-201ENST00000431358 1114 ntBASIC15.97■□□□□ 0.15
LINC01006Q8NI28 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
LINC01006Q8NI28 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC15.97■□□□□ 0.15
LINC01006Q8NI28 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC15.97■□□□□ 0.15
LINC01006Q8NI28 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC15.97■□□□□ 0.15
LINC01006Q8NI28 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms