Protein–RNA interactions for Protein: Q8NHY2

RFWD2, E3 ubiquitin-protein ligase RFWD2, humanhuman

Predictions only

Length 731 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD2Q8NHY2 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
RFWD2Q8NHY2 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC20.2■□□□□ 0.82
RFWD2Q8NHY2 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
RFWD2Q8NHY2 AC008406.3-201ENST00000620001 1374 ntBASIC20.2■□□□□ 0.82
RFWD2Q8NHY2 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RFWD2Q8NHY2 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
RFWD2Q8NHY2 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RFWD2Q8NHY2 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC20.19■□□□□ 0.82
RFWD2Q8NHY2 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC20.19■□□□□ 0.82
RFWD2Q8NHY2 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
RFWD2Q8NHY2 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RFWD2Q8NHY2 HES6-206ENST00000409574 738 ntTSL 2 BASIC20.19■□□□□ 0.82
RFWD2Q8NHY2 AC092171.4-201ENST00000609130 632 ntBASIC20.19■□□□□ 0.82
RFWD2Q8NHY2 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC20.19■□□□□ 0.82
RFWD2Q8NHY2 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
RFWD2Q8NHY2 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
RFWD2Q8NHY2 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
RFWD2Q8NHY2 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC20.19■□□□□ 0.82
RFWD2Q8NHY2 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
RFWD2Q8NHY2 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
RFWD2Q8NHY2 ASL-203ENST00000380839 1765 ntTSL 5 BASIC20.18■□□□□ 0.82
RFWD2Q8NHY2 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
RFWD2Q8NHY2 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC20.18■□□□□ 0.82
RFWD2Q8NHY2 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RFWD2Q8NHY2 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RFWD2Q8NHY2 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
RFWD2Q8NHY2 PTCHD3P2-201ENST00000424937 1205 ntBASIC20.18■□□□□ 0.82
RFWD2Q8NHY2 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC20.18■□□□□ 0.82
RFWD2Q8NHY2 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
RFWD2Q8NHY2 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
RFWD2Q8NHY2 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RFWD2Q8NHY2 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
RFWD2Q8NHY2 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RFWD2Q8NHY2 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC20.18■□□□□ 0.82
RFWD2Q8NHY2 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
RFWD2Q8NHY2 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RFWD2Q8NHY2 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
RFWD2Q8NHY2 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
RFWD2Q8NHY2 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RFWD2Q8NHY2 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
RFWD2Q8NHY2 AC011484.1-201ENST00000377652 1995 ntBASIC20.17■□□□□ 0.82
RFWD2Q8NHY2 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
RFWD2Q8NHY2 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RFWD2Q8NHY2 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RFWD2Q8NHY2 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
RFWD2Q8NHY2 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
RFWD2Q8NHY2 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RFWD2Q8NHY2 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
RFWD2Q8NHY2 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
RFWD2Q8NHY2 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
RFWD2Q8NHY2 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RFWD2Q8NHY2 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC20.17■□□□□ 0.82
RFWD2Q8NHY2 SYT6-210ENST00000641643 1587 ntBASIC20.17■□□□□ 0.82
RFWD2Q8NHY2 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC20.16■□□□□ 0.82
RFWD2Q8NHY2 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
RFWD2Q8NHY2 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
RFWD2Q8NHY2 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC20.16■□□□□ 0.82
RFWD2Q8NHY2 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC20.16■□□□□ 0.82
RFWD2Q8NHY2 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RFWD2Q8NHY2 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC20.16■□□□□ 0.82
RFWD2Q8NHY2 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC20.16■□□□□ 0.82
RFWD2Q8NHY2 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RFWD2Q8NHY2 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC20.16■□□□□ 0.82
RFWD2Q8NHY2 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
RFWD2Q8NHY2 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RFWD2Q8NHY2 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RFWD2Q8NHY2 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC20.16■□□□□ 0.82
RFWD2Q8NHY2 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RFWD2Q8NHY2 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RFWD2Q8NHY2 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
RFWD2Q8NHY2 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
RFWD2Q8NHY2 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
RFWD2Q8NHY2 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC20.16■□□□□ 0.82
RFWD2Q8NHY2 AC092720.2-201ENST00000602388 1665 ntBASIC20.16■□□□□ 0.82
RFWD2Q8NHY2 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RFWD2Q8NHY2 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
RFWD2Q8NHY2 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC20.16■□□□□ 0.82
RFWD2Q8NHY2 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RFWD2Q8NHY2 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
RFWD2Q8NHY2 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
RFWD2Q8NHY2 AP000974.1-201ENST00000623909 2387 ntBASIC20.15■□□□□ 0.82
RFWD2Q8NHY2 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RFWD2Q8NHY2 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
RFWD2Q8NHY2 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RFWD2Q8NHY2 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
RFWD2Q8NHY2 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
RFWD2Q8NHY2 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
RFWD2Q8NHY2 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC20.15■□□□□ 0.82
RFWD2Q8NHY2 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC20.15■□□□□ 0.82
RFWD2Q8NHY2 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC20.15■□□□□ 0.82
RFWD2Q8NHY2 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC20.15■□□□□ 0.82
RFWD2Q8NHY2 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RFWD2Q8NHY2 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
RFWD2Q8NHY2 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC20.15■□□□□ 0.82
RFWD2Q8NHY2 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
RFWD2Q8NHY2 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC20.15■□□□□ 0.82
RFWD2Q8NHY2 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
RFWD2Q8NHY2 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.82
RFWD2Q8NHY2 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
RFWD2Q8NHY2 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms