Protein–RNA interactions for Protein: Q8NBP0

TTC13, Tetratricopeptide repeat protein 13, humanhuman

Predictions only

Length 860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC13Q8NBP0 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
TTC13Q8NBP0 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC21.15■□□□□ 0.98
TTC13Q8NBP0 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TTC13Q8NBP0 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC21.14■□□□□ 0.98
TTC13Q8NBP0 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
TTC13Q8NBP0 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
TTC13Q8NBP0 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
TTC13Q8NBP0 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
TTC13Q8NBP0 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
TTC13Q8NBP0 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
TTC13Q8NBP0 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
TTC13Q8NBP0 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
TTC13Q8NBP0 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
TTC13Q8NBP0 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
TTC13Q8NBP0 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
TTC13Q8NBP0 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
TTC13Q8NBP0 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
TTC13Q8NBP0 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TTC13Q8NBP0 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
TTC13Q8NBP0 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TTC13Q8NBP0 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC21.13■□□□□ 0.97
TTC13Q8NBP0 AC004854.2-201ENST00000608450 1441 ntBASIC21.13■□□□□ 0.97
TTC13Q8NBP0 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TTC13Q8NBP0 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
TTC13Q8NBP0 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TTC13Q8NBP0 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC21.13■□□□□ 0.97
TTC13Q8NBP0 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TTC13Q8NBP0 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC21.13■□□□□ 0.97
TTC13Q8NBP0 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC21.13■□□□□ 0.97
TTC13Q8NBP0 MIR5787-201ENST00000611784 55 ntBASIC21.13■□□□□ 0.97
TTC13Q8NBP0 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
TTC13Q8NBP0 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
TTC13Q8NBP0 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC21.13■□□□□ 0.97
TTC13Q8NBP0 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
TTC13Q8NBP0 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
TTC13Q8NBP0 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC21.13■□□□□ 0.97
TTC13Q8NBP0 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
TTC13Q8NBP0 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TTC13Q8NBP0 RBM17P2-201ENST00000616397 1405 ntBASIC21.12■□□□□ 0.97
TTC13Q8NBP0 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TTC13Q8NBP0 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TTC13Q8NBP0 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TTC13Q8NBP0 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
TTC13Q8NBP0 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
TTC13Q8NBP0 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
TTC13Q8NBP0 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC21.12■□□□□ 0.97
TTC13Q8NBP0 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
TTC13Q8NBP0 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
TTC13Q8NBP0 KRT19P1-201ENST00000405746 1186 ntBASIC21.12■□□□□ 0.97
TTC13Q8NBP0 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
TTC13Q8NBP0 AC091799.1-201ENST00000422823 811 ntBASIC21.12■□□□□ 0.97
TTC13Q8NBP0 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC21.12■□□□□ 0.97
TTC13Q8NBP0 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
TTC13Q8NBP0 FGF8-207ENST00000618991 856 ntTSL 3 BASIC21.12■□□□□ 0.97
TTC13Q8NBP0 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
TTC13Q8NBP0 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC21.12■□□□□ 0.97
TTC13Q8NBP0 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC21.12■□□□□ 0.97
TTC13Q8NBP0 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TTC13Q8NBP0 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC21.12■□□□□ 0.97
TTC13Q8NBP0 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TTC13Q8NBP0 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
TTC13Q8NBP0 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC21.12■□□□□ 0.97
TTC13Q8NBP0 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
TTC13Q8NBP0 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC21.11■□□□□ 0.97
TTC13Q8NBP0 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC21.11■□□□□ 0.97
TTC13Q8NBP0 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TTC13Q8NBP0 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC21.11■□□□□ 0.97
TTC13Q8NBP0 USP39-204ENST00000409766 2033 ntTSL 2 BASIC21.11■□□□□ 0.97
TTC13Q8NBP0 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TTC13Q8NBP0 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
TTC13Q8NBP0 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TTC13Q8NBP0 AC007322.3-201ENST00000426526 701 ntBASIC21.11■□□□□ 0.97
TTC13Q8NBP0 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC21.11■□□□□ 0.97
TTC13Q8NBP0 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC21.11■□□□□ 0.97
TTC13Q8NBP0 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC21.11■□□□□ 0.97
TTC13Q8NBP0 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
TTC13Q8NBP0 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC21.11■□□□□ 0.97
TTC13Q8NBP0 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC21.11■□□□□ 0.97
TTC13Q8NBP0 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
TTC13Q8NBP0 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TTC13Q8NBP0 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TTC13Q8NBP0 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
TTC13Q8NBP0 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TTC13Q8NBP0 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
TTC13Q8NBP0 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
TTC13Q8NBP0 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
TTC13Q8NBP0 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
TTC13Q8NBP0 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC21.1■□□□□ 0.97
TTC13Q8NBP0 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
TTC13Q8NBP0 AC026271.2-201ENST00000428091 497 ntBASIC21.1■□□□□ 0.97
TTC13Q8NBP0 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC21.1■□□□□ 0.97
TTC13Q8NBP0 CD44-222ENST00000526025 1052 ntTSL 2 BASIC21.1■□□□□ 0.97
TTC13Q8NBP0 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
TTC13Q8NBP0 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
TTC13Q8NBP0 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
TTC13Q8NBP0 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TTC13Q8NBP0 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
TTC13Q8NBP0 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
TTC13Q8NBP0 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
TTC13Q8NBP0 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms