Protein–RNA interactions for Protein: Q8N6Y1

PCDH20, Protocadherin-20, humanhuman

Known RBP Predictions only

Length 951 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH20Q8N6Y1 AC073130.3-201ENST00000624389 2278 ntBASIC20.89■□□□□ 0.93
PCDH20Q8N6Y1 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC20.89■□□□□ 0.93
PCDH20Q8N6Y1 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC20.89■□□□□ 0.93
PCDH20Q8N6Y1 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC20.89■□□□□ 0.93
PCDH20Q8N6Y1 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
PCDH20Q8N6Y1 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PCDH20Q8N6Y1 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
PCDH20Q8N6Y1 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PCDH20Q8N6Y1 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
PCDH20Q8N6Y1 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
PCDH20Q8N6Y1 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PCDH20Q8N6Y1 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
PCDH20Q8N6Y1 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
PCDH20Q8N6Y1 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC20.88■□□□□ 0.93
PCDH20Q8N6Y1 PPP1R14BP2-201ENST00000426284 444 ntBASIC20.88■□□□□ 0.93
PCDH20Q8N6Y1 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PCDH20Q8N6Y1 APTR-205ENST00000447009 902 ntTSL 2 BASIC20.88■□□□□ 0.93
PCDH20Q8N6Y1 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
PCDH20Q8N6Y1 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC20.88■□□□□ 0.93
PCDH20Q8N6Y1 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC20.88■□□□□ 0.93
PCDH20Q8N6Y1 CYP2T3P-201ENST00000601990 817 ntBASIC20.88■□□□□ 0.93
PCDH20Q8N6Y1 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PCDH20Q8N6Y1 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
PCDH20Q8N6Y1 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PCDH20Q8N6Y1 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
PCDH20Q8N6Y1 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PCDH20Q8N6Y1 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
PCDH20Q8N6Y1 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
PCDH20Q8N6Y1 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC20.87■□□□□ 0.93
PCDH20Q8N6Y1 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PCDH20Q8N6Y1 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC20.87■□□□□ 0.93
PCDH20Q8N6Y1 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
PCDH20Q8N6Y1 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC20.87■□□□□ 0.93
PCDH20Q8N6Y1 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC20.87■□□□□ 0.93
PCDH20Q8N6Y1 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC20.87■□□□□ 0.93
PCDH20Q8N6Y1 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC20.87■□□□□ 0.93
PCDH20Q8N6Y1 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PCDH20Q8N6Y1 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
PCDH20Q8N6Y1 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC20.87■□□□□ 0.93
PCDH20Q8N6Y1 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC20.87■□□□□ 0.93
PCDH20Q8N6Y1 AC098934.4-201ENST00000564127 592 ntBASIC20.87■□□□□ 0.93
PCDH20Q8N6Y1 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
PCDH20Q8N6Y1 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
PCDH20Q8N6Y1 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
PCDH20Q8N6Y1 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
PCDH20Q8N6Y1 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PCDH20Q8N6Y1 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PCDH20Q8N6Y1 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC20.87■□□□□ 0.93
PCDH20Q8N6Y1 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PCDH20Q8N6Y1 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PCDH20Q8N6Y1 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC20.86■□□□□ 0.93
PCDH20Q8N6Y1 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PCDH20Q8N6Y1 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC20.86■□□□□ 0.93
PCDH20Q8N6Y1 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
PCDH20Q8N6Y1 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
PCDH20Q8N6Y1 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
PCDH20Q8N6Y1 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PCDH20Q8N6Y1 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC20.86■□□□□ 0.93
PCDH20Q8N6Y1 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC20.86■□□□□ 0.93
PCDH20Q8N6Y1 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC20.86■□□□□ 0.93
PCDH20Q8N6Y1 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC20.86■□□□□ 0.93
PCDH20Q8N6Y1 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC20.86■□□□□ 0.93
PCDH20Q8N6Y1 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC20.86■□□□□ 0.93
PCDH20Q8N6Y1 AL049796.1-201ENST00000565336 1766 ntBASIC20.86■□□□□ 0.93
PCDH20Q8N6Y1 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
PCDH20Q8N6Y1 CYP21A1P-202ENST00000354927 1481 ntBASIC20.86■□□□□ 0.93
PCDH20Q8N6Y1 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
PCDH20Q8N6Y1 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC20.86■□□□□ 0.93
PCDH20Q8N6Y1 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC20.86■□□□□ 0.93
PCDH20Q8N6Y1 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
PCDH20Q8N6Y1 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PCDH20Q8N6Y1 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
PCDH20Q8N6Y1 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
PCDH20Q8N6Y1 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
PCDH20Q8N6Y1 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PCDH20Q8N6Y1 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PCDH20Q8N6Y1 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC20.85■□□□□ 0.93
PCDH20Q8N6Y1 LSM12P1-201ENST00000411836 588 ntBASIC20.85■□□□□ 0.93
PCDH20Q8N6Y1 AL355472.2-201ENST00000422958 438 ntBASIC20.85■□□□□ 0.93
PCDH20Q8N6Y1 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC20.85■□□□□ 0.93
PCDH20Q8N6Y1 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC20.85■□□□□ 0.93
PCDH20Q8N6Y1 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC20.85■□□□□ 0.93
PCDH20Q8N6Y1 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
PCDH20Q8N6Y1 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PCDH20Q8N6Y1 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
PCDH20Q8N6Y1 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
PCDH20Q8N6Y1 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PCDH20Q8N6Y1 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
PCDH20Q8N6Y1 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC20.84■□□□□ 0.93
PCDH20Q8N6Y1 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC20.84■□□□□ 0.93
PCDH20Q8N6Y1 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
PCDH20Q8N6Y1 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC20.84■□□□□ 0.93
PCDH20Q8N6Y1 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
PCDH20Q8N6Y1 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC20.84■□□□□ 0.93
PCDH20Q8N6Y1 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
PCDH20Q8N6Y1 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC20.84■□□□□ 0.93
PCDH20Q8N6Y1 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
PCDH20Q8N6Y1 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC20.84■□□□□ 0.93
PCDH20Q8N6Y1 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PCDH20Q8N6Y1 AC011484.1-201ENST00000377652 1995 ntBASIC20.84■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms